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K562细胞来源的微泡与亲代细胞中微小RNA表达谱的比较及其在白血病中的作用分析

Comparison of microRNA expression profiles in K562-cells-derived microvesicles and parental cells, and analysis of their roles in leukemia.

作者信息

Chen Xiaomei, Xiong Wei, Li Huiyu

机构信息

Center for Biotherapy, Gansu Provincial Hospital, Lanzhou, Gansu 730000, P.R. China.

Center of Clinical Laboratory, The Second Affiliated Hospital of Zhejiang University School of Medicine at Binjiang, Hangzhou, Zhejiang 310009, P.R. China.

出版信息

Oncol Lett. 2016 Dec;12(6):4937-4948. doi: 10.3892/ol.2016.5308. Epub 2016 Oct 24.

Abstract

Microvesicles (MVs) are 30-1,000-nm extracellular vesicles that are released from a multitude of cell types and perform diverse cellular functions, including intercellular communication, antigen presentation, and transfer of proteins, messenger RNA and microRNA (also known as miR). MicroRNAs have been demonstrated to be aberrantly expressed in leukemia, and the overall microRNA expression profile may differentiate normal blood cells vs. leukemia cells. MVs containing microRNAs may enable intercellular cross-talk . This prompted us to investigate specific variations of microRNA expression patterns in MVs derived from leukemia cells. The present study examined the microRNA expression profile of MVs from chronic myeloid leukemia K562 cells and that of MVs from normal human volunteers' peripheral blood cells. The potential targets of the differentially expressed microRNAs were predicted using computational searches. Bioinformatic analyses of the predicted target genes were performed for further evaluation. The present study analyzed microRNAs of MVs derived from leukemia and normal cells, and characterized specific microRNAs expression. The results revealed that MVs derived from K562 cells expressed 181 microRNAs of the 888 microRNAs assessed. Further analysis revealed that 16 microRNAs were downregulated, while 7 were upregulated in these MVs. In addition, significant differences in microRNA expression profiles between MVs derived from K562 cells and K562 cells were identified. The present results revealed that 77 and 122 microRNAs were only expressed in MVs derived from K562 cells and in K562 cells, respectively. There were 104 microRNAs co-expressed in MVs derived from K562 cells and in K562 cells. Target gene-related pathway analyses demonstrated that the majority of the dysregulated microRNAs were involved in pathways associated with leukemia, particularly the mitogen-activated protein kinase (MAPK) and the p53 signaling pathways. By further conducting microRNA gene network analysis, the present study revealed that the miR-15a/b, miR-16, miR-17 and miR-30 families were likely to play a role in the regulation of the MAPK signaling pathway. Since K562 cells presented the t(9;22) translocation, the current study further examined the predicted function of 12 microRNAs located in chromosomes 9 [Homo sapiens (hsa)-let-7a, hsa-let-7f, miR-126, miR-126*, miR-23b, miR-24, miR-27b and miR-7] and 22 (hsa-let-7b, miR-1249, miR-130b and miR-185), which were expressed both in MVs derived from K562 cells and in K562 cells. The present study identified microRNAs of MVs from leukemia and normal cells, and characterized the expression of specific microRNAs. The current study is also the first to identify and characterize distinct microRNA expression between MVs derived from K562 cells and K562 cells. These findings highlight that a number of microRNAs from leukemia-derived MVs may contribute to the development of hematopoietic malignancies. Further investigation may reveal the function of these differentially expressed microRNAs and may provide potential targets for novel therapeutic strategies.

摘要

微泡(MVs)是直径为30 - 1000纳米的细胞外囊泡,可从多种细胞类型释放,并执行多种细胞功能,包括细胞间通讯、抗原呈递以及蛋白质、信使核糖核酸和微小核糖核酸(也称为miR)的传递。微小核糖核酸已被证明在白血病中表达异常,并且整体微小核糖核酸表达谱可能区分正常血细胞与白血病细胞。含有微小核糖核酸的微泡可能实现细胞间的相互作用。这促使我们研究源自白血病细胞的微泡中微小核糖核酸表达模式的特定变化。本研究检测了慢性髓性白血病K562细胞来源的微泡以及正常人类志愿者外周血细胞来源的微泡的微小核糖核酸表达谱。使用计算机搜索预测差异表达微小核糖核酸的潜在靶标。对预测的靶基因进行生物信息学分析以作进一步评估。本研究分析了源自白血病细胞和正常细胞的微泡中的微小核糖核酸,并对特定微小核糖核酸的表达进行了表征。结果显示,在评估的888种微小核糖核酸中,源自K562细胞的微泡表达了181种微小核糖核酸。进一步分析显示,这些微泡中有16种微小核糖核酸表达下调,7种表达上调。此外,还确定了源自K562细胞的微泡与K562细胞之间微小核糖核酸表达谱的显著差异。目前结果显示77种和122种微小核糖核酸分别仅在源自K562细胞的微泡和K562细胞中表达。有104种微小核糖核酸在源自K562细胞的微泡和K562细胞中共同表达。靶基因相关通路分析表明,大多数失调的微小核糖核酸参与了与白血病相关的通路,特别是丝裂原活化蛋白激酶(MAPK)和p53信号通路。通过进一步进行微小核糖核酸基因网络分析,本研究显示miR - 15a/b、miR - 16、miR - 17和miR - 30家族可能在MAPK信号通路调节中发挥作用。由于K562细胞存在t(9;22)易位,本研究进一步检测了位于9号染色体[智人(hsa)- let - 7a、hsa - let - 7f、miR - 126、miR - 126*、miR - 23b、miR - 24、miR - 27b和miR - 7]和22号染色体(hsa - let - 7b、miR - 1249、miR - 130b和miR - 185)上的12种微小核糖核酸的预测功能,这些微小核糖核酸在源自K562细胞的微泡和K56细胞中均有表达。本研究鉴定了白血病细胞和正常细胞来源的微泡中的微小核糖核酸,并对特定微小核糖核酸的表达进行了表征。本研究也是首次鉴定并表征源自K562细胞的微泡与K562细胞之间不同的微小核糖核酸表达。这些发现突出表明,白血病来源微泡中的许多微小核糖核酸可能促成造血系统恶性肿瘤的发展。进一步研究可能揭示这些差异表达微小核糖核酸的功能,并可能为新的治疗策略提供潜在靶点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4867/5228523/2444da6cb955/ol-12-06-4937-g00.jpg

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