Suppr超能文献

定量糖组学:一种综合分析与生物信息学方法

Quantitative Glycomics: A Combined Analytical and Bioinformatics Approach.

作者信息

Veillon L, Zhou S, Mechref Y

机构信息

Texas Tech University, Lubbock, TX, United States.

Texas Tech University, Lubbock, TX, United States.

出版信息

Methods Enzymol. 2017;585:431-477. doi: 10.1016/bs.mie.2016.11.006. Epub 2017 Jan 9.

Abstract

Glycosylation is one of the most common and essential protein modifications. Glycans conjugated to biomolecules modulate the function of such molecules through both direct recognition of glycan structures and indirect mechanisms that involve the control of protein turnover rates, stability, and conformation. The biological attributes of glycans in numerous biological processes and implications in a number of diseases highlight the necessity for comprehensive characterization of protein glycosylation. This chapter reviews cutting-edge methods and tools developed to facilitate quantitative glycomics. This chapter highlights the different methods employed for the release and purification of glycans from biological samples. The most effective labeling methods developed for sensitive quantitative glycomics are also described and discussed. The chromatographic approaches that have been used effectively in glycomics are also highlighted.

摘要

糖基化是最常见且重要的蛋白质修饰之一。与生物分子共轭的聚糖通过对聚糖结构的直接识别以及涉及控制蛋白质周转率、稳定性和构象的间接机制来调节此类分子的功能。聚糖在众多生物过程中的生物学特性以及在多种疾病中的影响凸显了全面表征蛋白质糖基化的必要性。本章综述了为促进定量糖组学而开发的前沿方法和工具。本章重点介绍了从生物样品中释放和纯化聚糖所采用的不同方法。还描述并讨论了为灵敏的定量糖组学而开发的最有效的标记方法。同时也强调了在糖组学中有效使用的色谱方法。

相似文献

3
Bioinformatics protocols in glycomics and glycoproteomics.糖组学和糖蛋白质组学中的生物信息学协议。
Curr Protoc Protein Sci. 2014 Apr 1;76:2.15.1-2.15.7. doi: 10.1002/0471140864.ps0215s76.
7
Solid-phase glycan isolation for glycomics analysis.糖组学分析中的固相糖基分离。
Proteomics Clin Appl. 2012 Dec;6(11-12):596-608. doi: 10.1002/prca.201200045.

引用本文的文献

2
Mass Spectrometry Imaging for Glycome in the Brain.大脑中糖组的质谱成像
Front Neuroanat. 2021 Jul 29;15:711955. doi: 10.3389/fnana.2021.711955. eCollection 2021.
4
glypy: An Open Source Glycoinformatics Library.glypy:一个开源的糖生物信息学库。
J Proteome Res. 2019 Sep 6;18(9):3532-3537. doi: 10.1021/acs.jproteome.9b00367. Epub 2019 Jul 30.
8
Characterization of isomeric glycan structures by LC-MS/MS.通过液相色谱-串联质谱法对异构聚糖结构进行表征
Electrophoresis. 2017 Sep;38(17):2100-2114. doi: 10.1002/elps.201700042. Epub 2017 May 17.

本文引用的文献

3
Oxidative release of natural glycans for functional glycomics.用于功能糖组学的天然聚糖的氧化释放
Nat Methods. 2016 Jun;13(6):528-34. doi: 10.1038/nmeth.3861. Epub 2016 May 2.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验