Taylor Rachel L, Handley Mark T, Waller Sarah, Campbell Christopher, Urquhart Jill, Meynert Alison M, Ellingford Jamie M, Donnelly Deirdre, Wilcox Gisela, Lloyd I Chris, Mundy Helen, FitzPatrick David R, Deshpande Charu, Clayton-Smith Jill, Black Graeme C
Manchester Centre for Genomic Medicine, Division of Evolution and Genomic Sciences, Faculty of Biology, Medicines and Health, The University of Manchester, Manchester Academic Health Science Centre (MAHSC), Saint Mary's Hospital, Manchester, United Kingdom.
Medical Research Council (MRC) Human Genetics Unit, Institute of Genetic and Molecular Medicine, University of Edinburgh, Edinburgh, United Kingdom.
Invest Ophthalmol Vis Sci. 2017 Jan 1;58(1):594-603. doi: 10.1167/iovs.16-21026.
Peroxisomes perform complex metabolic and catabolic functions essential for normal growth and development. Mutations in 14 genes cause a spectrum of peroxisomal disease in humans. Most recently, PEX11B was associated with an atypical peroxisome biogenesis disorder (PBD) in a single individual. In this study, we identify further PEX11B cases and delineate associated phenotypes.
Probands from three families underwent next generation sequencing (NGS) for diagnosis of a multisystem developmental disorder. Autozygosity mapping was conducted in one affected sibling pair. ExomeDepth was used to identify copy number variants from NGS data and confirmed by dosage analysis. Biochemical profiling was used to investigate the metabolic signature of the condition.
All patients presented with bilateral cataract at birth but the systemic phenotype was variable, including short stature, skeletal abnormalities, and dysmorphism-features not described in the original case. Next generation sequencing identified biallelic loss-of-function mutations in PEX11B as the underlying cause of disease in each case (PEX11B c.235C>T p.(Arg79Ter) homozygous; PEX11B c.136C>T p.(Arg46Ter) homozygous; PEX11B c.595C>T p.(Arg199Ter) heterozygous, PEX11B ex1-3 del heterozygous). Biochemical studies identified very low plasmalogens in one patient, whilst a mildly deranged very long chain fatty acid profile was found in another.
Our findings expand the phenotypic spectrum of the condition and underscore congenital cataract as the consistent primary presenting feature. We also find that biochemical measurements of peroxisome function may be disturbed in some cases. Furthermore, diagnosis by NGS is proficient and may circumvent the requirement for an invasive skin biopsy for disease identification from fibroblast cells.
过氧化物酶体执行对正常生长和发育至关重要的复杂代谢和分解代谢功能。14个基因的突变会导致人类一系列过氧化物酶体疾病。最近,PEX11B与一名个体的非典型过氧化物酶体生物发生障碍(PBD)相关。在本研究中,我们鉴定了更多PEX11B病例并描述了相关表型。
来自三个家庭的先证者接受了下一代测序(NGS)以诊断多系统发育障碍。对一对受影响的同胞进行了纯合性定位。使用ExomeDepth从NGS数据中识别拷贝数变异,并通过剂量分析进行确认。生化分析用于研究该病症的代谢特征。
所有患者出生时均患有双侧白内障,但全身表型各不相同,包括身材矮小、骨骼异常和畸形特征,这些特征在最初的病例中并未描述。下一代测序确定,每个病例中PEX11B的双等位基因功能丧失突变是疾病的根本原因(PEX11B c.235C>T p.(Arg79Ter) 纯合;PEX11B c.136C>T p.(Arg46Ter) 纯合;PEX11B c.595C>T p.(Arg199Ter) 杂合,PEX11B ex1-3 del杂合)。生化研究发现一名患者的缩醛磷脂水平极低,而另一名患者的极长链脂肪酸谱有轻度紊乱。
我们的研究结果扩展了该病症的表型谱,并强调先天性白内障是一致的主要表现特征。我们还发现,在某些情况下,过氧化物酶体功能的生化测量可能会受到干扰。此外,通过NGS进行诊断很有效,并且可能无需进行侵入性皮肤活检来从成纤维细胞中识别疾病。