Williamson Heather R, Sehanobish Esha, Shiller Alan M, Sanchez-Amat Antonio, Davidson Victor L
Burnett School of Biomedical Sciences, College of Medicine, University of Central Florida , Orlando, Florida 32827, United States.
Division of Marine Science, The University of Southern Mississippi, Stennis Space Center , Mississippi 39529, United States.
Biochemistry. 2017 Feb 21;56(7):997-1004. doi: 10.1021/acs.biochem.6b01137. Epub 2017 Feb 10.
The first posttranslational modification step in the biosynthesis of the tryptophan-derived quinone cofactors is the autocatalytic hydroxylation of a specific Trp residue at position C-7 on the indole side chain. Subsequent modifications are catalyzed by modifying enzymes, but the mechanism by which this first step occurs is unknown. LodA possesses a cysteine tryptophylquinone (CTQ) cofactor. Metal analysis as well as spectroscopic and kinetic studies of the mature and precursor forms of a D512A LodA variant provides evidence that copper is required for the initial hydroxylation of the precursor protein and that if alternative metals are bound, the modification does not occur and the precursor is unstable. It is shown that the mature native LodA also contains loosely bound copper, which affects the visible absorbance spectrum and quenches the fluorescence spectrum that is attributed to the mature CTQ cofactor. When copper is removed, the fluorescence appears, and when it is added back to the protein, the fluorescence is quenched, indicating that copper reversibly binds in the proximity of CTQ. Removal of copper does not diminish the enzymatic activity of LodA. This distinguishes LodA from enzymes with protein-derived tyrosylquinone cofactors in which copper is present near the cofactor and is absolutely required for activity. Mechanisms are proposed for the role of copper in the hydroxylation of the unactivated Trp side chain. These results demonstrate that the reason that the highly conserved Asp512 is critical for LodA, and possibly all tryptophylquinone enzymes, is not because it is required for catalysis but because it is necessary for CTQ biosynthesis, more specifically to facilitate the initial copper-dependent hydroxylation of a specific Trp residue.
色氨酸衍生的醌类辅因子生物合成中的第一步翻译后修饰是吲哚侧链上C-7位特定色氨酸残基的自催化羟基化。后续修饰由修饰酶催化,但第一步发生的机制尚不清楚。LodA具有半胱氨酸色氨酸醌(CTQ)辅因子。对D512A LodA变体的成熟形式和前体形式进行的金属分析以及光谱和动力学研究提供了证据,表明铜是前体蛋白初始羟基化所必需的,并且如果结合了替代金属,则修饰不会发生且前体不稳定。结果表明,成熟的天然LodA也含有松散结合的铜,这会影响可见吸收光谱并淬灭归因于成熟CTQ辅因子的荧光光谱。去除铜后,荧光出现,当将其重新添加到蛋白质中时,荧光被淬灭,表明铜在CTQ附近可逆结合。去除铜不会降低LodA的酶活性。这将LodA与具有蛋白质衍生的酪氨酰醌辅因子的酶区分开来,在这些酶中,铜存在于辅因子附近且是活性绝对必需的。提出了铜在未活化色氨酸侧链羟基化中的作用机制。这些结果表明,高度保守的天冬氨酸512对LodA以及可能所有色氨酸醌酶至关重要的原因,不是因为它是催化所必需的,而是因为它是CTQ生物合成所必需的,更具体地说是为了促进特定色氨酸残基的初始铜依赖性羟基化。