Oakes Eimile, Anderson Ashley, Cohen-Gadol Aaron, Hundley Heather A
From the Department of Biology and.
Medical Sciences Program, Indiana University, Bloomington, Indiana 47405 and.
J Biol Chem. 2017 Mar 10;292(10):4326-4335. doi: 10.1074/jbc.M117.779868. Epub 2017 Feb 6.
RNA editing is a cellular process that precisely alters nucleotide sequences, thus regulating gene expression and generating protein diversity. Over 60% of human transcripts undergo adenosine to inosine RNA editing, and editing is required for normal development and proper neuronal function of animals. Editing of one adenosine in the transcript encoding the glutamate receptor subunit B, glutamate receptor ionotropic AMPA 2 (GRIA2), modifies a codon, replacing the genomically encoded glutamine (Q) with arginine (R); thus this editing site is referred to as the Q/R site. Editing at the Q/R site of is essential, and reduced editing of transcripts has been observed in patients suffering from glioblastoma. In glioblastoma, incorporation of unedited GRIA2 subunits leads to a calcium-permeable glutamate receptor, which can promote cell migration and tumor invasion. In this study, we identify adenosine deaminase that acts on RNA 3 (ADAR3) as an important regulator of Q/R site editing, investigate its mode of action, and detect elevated ADAR3 expression in glioblastoma tumors compared with adjacent brain tissue. Overexpression of ADAR3 in astrocyte and astrocytoma cell lines inhibits RNA editing at the Q/R site of Furthermore, the double-stranded RNA binding domains of ADAR3 are required for repression of RNA editing. As the Q/R site of is specifically edited by ADAR2, we suggest that ADAR3 directly competes with ADAR2 for binding to transcript, inhibiting RNA editing, as evidenced by the direct binding of ADAR3 to the pre-mRNA. Finally, we provide evidence that both ADAR2 and ADAR3 expression contributes to the relative level of editing in tumors from patients suffering from glioblastoma.
RNA编辑是一种细胞过程,可精确改变核苷酸序列,从而调节基因表达并产生蛋白质多样性。超过60%的人类转录本会发生腺苷到肌苷的RNA编辑,且编辑对于动物的正常发育和正常神经元功能是必需的。编码谷氨酸受体亚基B(离子型AMPA 2型谷氨酸受体,GRIA2)的转录本中的一个腺苷编辑会改变一个密码子,将基因组编码的谷氨酰胺(Q)替换为精氨酸(R);因此这个编辑位点被称为Q/R位点。GRIA2的Q/R位点编辑至关重要,在胶质母细胞瘤患者中已观察到GRIA2转录本的编辑减少。在胶质母细胞瘤中,未编辑的GRIA2亚基的掺入导致一种钙通透性谷氨酸受体,可促进细胞迁移和肿瘤侵袭。在本研究中,我们确定作用于RNA 3的腺苷脱氨酶(ADAR3)是Q/R位点编辑的重要调节因子,研究其作用模式,并检测到与相邻脑组织相比,胶质母细胞瘤肿瘤中ADAR3表达升高。在星形胶质细胞和星形细胞瘤细胞系中过表达ADAR3会抑制GRIA2的Q/R位点的RNA编辑。此外,ADAR3的双链RNA结合结构域是抑制RNA编辑所必需的。由于GRIA2的Q/R位点由ADAR2特异性编辑,我们认为ADAR3直接与ADAR2竞争结合GRIA2转录本,抑制RNA编辑,ADAR3与GRIA2前体mRNA的直接结合证明了这一点。最后,我们提供证据表明,ADAR2和ADAR3的表达均有助于胶质母细胞瘤患者肿瘤中GRIA2编辑的相对水平。