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上下求索:在安第斯山脉濒危热带棕榈(桂木族:桂棕属)的一个单系支系中,种群分歧且基因交流甚少。

Up and Down the Blind Alley: Population Divergence with Scant Gene Flow in an Endangered Tropical Lineage of Andean Palms (Ceroxylon quindiuense Clade: Ceroxyloideae).

机构信息

From the Universidad CES, Calle 10 A No. 22 - 04Medellín, Colombia (Sanín); Instituto de Ciencias Naturales, Universidad Nacional de Colombia, Bogotá, Colombia (Galeano); Agrobiodiversity Research Area, International Center for Tropical Agriculture (CIAT), Cali, Colombia (Zapata, Bohórquez, and Tohme); Institut de Recherche pour le Développement IRD-CIRAD, TA A51/PS2, Montpellier cedex 5, France (Pintaud); and Department of Bioscience, Aarhus University, Aarhus, Denmark (Hansen).

出版信息

J Hered. 2017 Apr 1;108(3):288-298. doi: 10.1093/jhered/esx006.

Abstract

Given the geographical complexity of the Andes, species distributions hold interesting information regarding the history of isolation and gene flow across geographic barriers and ecological gradients. Moreover, current threats to the region's enormous plant diversity pose an additional challenge to the understanding of these patterns. We explored the geographic structure of genetic diversity within the Ceroxylon quindiuense species complex (wax palms) at a regional scale, using a model-based approach to disentangle the historical mechanisms by which these species have dispersed over a range encompassing 17° of latitude in the tropical Andes. A total of 10 microsatellite loci were cross-amplified in 8 populations of the 3 species comprising the C. quindiuense complex. Analyses performed include estimates of molecular diversity and genetic structure, testing for genetic bottlenecks and an evaluation of the colonization scenario under approximate Bayesian computation. We showed that there was a geographical diversity gradient reflecting the orogenetic pattern of the northern Andes and its end at the cordilleras facing the Caribbean Sea. A general pattern of diversity suggests that the cordilleras of Colombia have served as historical recipients of gene flow occurring only scantly along the northern Andes. We provided evidence of important isolation between the largest populations of this complex, suggesting that both historical constraints to dispersal but also current anthropogenic effects might explain the high levels of population structuring. We provide a list of advisable measures for conservation stakeholders.

摘要

鉴于安第斯山脉的地理复杂性,物种分布情况为了解隔离和基因流在地理屏障和生态梯度上的历史提供了有趣的信息。此外,该地区巨大的植物多样性所面临的当前威胁也对理解这些模式提出了额外的挑战。我们在区域尺度上探索了蜡棕榈属(Ceroxylon quindiuense 种复合体)的遗传多样性的地理结构,采用基于模型的方法来梳理这些物种在跨越热带安第斯山脉 17 度纬度范围内扩散的历史机制。在包含蜡棕榈属复合体的 3 个物种的 8 个种群中,共交叉扩增了 10 个微卫星基因座。进行的分析包括分子多样性和遗传结构的估计、遗传瓶颈的测试以及近似贝叶斯计算下的殖民情景评估。结果表明,存在一个地理多样性梯度,反映了北安第斯山脉的造山模式及其在面对加勒比海的山脉尽头。多样性的总体格局表明,哥伦比亚的山脉是基因流动的历史接受者,而这种流动只在北安第斯山脉的少量地区发生。我们提供了证据表明,该复合体中最大的种群之间存在重要的隔离,这表明历史上的扩散限制以及当前的人为影响可能解释了高种群结构水平的原因。我们为保护利益相关者提供了一份建议措施清单。

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