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多亲分子与带氟亲脂侧链在 DPPC 双层中的构象空间。

Conformational Space of a Polyphilic Molecule with a Fluorophilic Side Chain Integrated in a DPPC Bilayer.

机构信息

Department of Physics and Astronomy, University College London, Gower Street, London, United Kingdom.

Institute of Chemistry, Martin-Luther-Universität Halle-Wittenberg, von-Danckelmann-Platz 4, Halle, 06120, Germany.

出版信息

J Comput Chem. 2017 Apr 5;38(9):576-583. doi: 10.1002/jcc.24711.

Abstract

We investigate the conformational space of a polyphilic molecule with hydrophilic, lipophilic and fluorophilic parts inserted as a transmembrane agent into a dipalmitoylphosphatidylcholine bilayer by means of all-atom molecular dynamics simulations. Special focus is put on the competing structural driving forces arising from the hydrophilic, lipophilic and fluorophilic side chains and the aromatic backbone of the polyphile. We observe a significant difference between the lipophilic and the fluorophilic side chains regarding their intramembrane distribution. While the lipophilic groups remain membrane-centered, the fluorophilic parts tend to orient toward the phosphate headgroups. This trend is important for understanding the influence of polyphile agents on the properties of phospholipid membranes. From a fundamental point of view, our computed distribution functions of the side chains are related to the interplay of sterical, enthalpic and entropic driving forces. Our findings illustrate the potential of rationally designed membrane additives which can be exploited to tune the properties of phospholipid membranes. © 2017 Wiley Periodicals, Inc.

摘要

我们通过全原子分子动力学模拟研究了一种多亲分子的构象空间,该分子具有亲水、亲脂和亲氟部分,作为跨膜试剂插入二棕榈酰磷脂酰胆碱双层中。特别关注的是来自亲水、亲脂和亲氟侧链以及多亲分子的芳基主链的竞争结构驱动力。我们观察到亲脂侧链和亲氟侧链在膜内分布上存在显著差异。虽然亲脂基团仍然以膜为中心,但亲氟部分倾向于朝向磷酸头基定向。这种趋势对于理解多亲试剂对磷脂膜性质的影响很重要。从根本的角度来看,我们计算的侧链分布函数与空间、焓和熵驱动力的相互作用有关。我们的研究结果说明了合理设计的膜添加剂的潜力,这些添加剂可以用来调节磷脂膜的性质。

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