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(3)-5-硝基-3-(2-苯基肼叉基)-1-吲哚-2(3)-酮的晶体结构

Crystal structure of (3)-5-nitro-3-(2-phenyl-hydrazinyl-idene)-1-indol-2(3)-one.

作者信息

Velasques Jecika Maciel, Gervini Vanessa Carratu, Bortoluzzi Adaílton João, de Farias Renan Lira, de Oliveira Adriano Bof

机构信息

Universidade Federal do Rio Grande (FURG), Escola de Química e Alimentos, Rio Grande, Brazil.

Universidade Federal de Santa Catarina (UFSC), Departamento de Química, Florianópolis, Brazil.

出版信息

Acta Crystallogr E Crystallogr Commun. 2017 Jan 13;73(Pt 2):168-172. doi: 10.1107/S2056989016020375. eCollection 2017 Feb 1.

DOI:10.1107/S2056989016020375
PMID:28217335
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5290558/
Abstract

The reaction between 5-nitro-isatin and phenyl-hydrazine in acidic ethanol yields the title compound, CHNO, whose mol-ecular structure deviates slightly from a planar geometry (r.m.s. deviation = 0.065 Å for the mean plane through all non-H atoms). An intra-molecular N-H⋯O hydrogen bond is present, forming a ring of graph-set motif (6). In the crystal, mol-ecules are linked by N-H⋯O and C-H⋯O hydrogen-bonding inter-actions into a two-dimensional network along (120), and rings of graph-set motif (8), (26) and (32) are observed. Additionally, a Hirshfeld surface analysis suggests that the mol-ecules are stacked along [100] through C=O⋯ inter-actions and indicates that the most important contributions for the crystal structure are O⋯H (28.5%) and H⋯H (26.7%) inter-actions. An evaluation of the title compound with the DHFR enzyme (di-hydro-folate reductase) was performed. The isatin-hydrazone derivative and the active site of the selected enzyme show N-H⋯O(), N-H⋯O() and ⋯() inter-actions.

摘要

5-硝基异吲哚酮与苯肼在酸性乙醇中反应生成标题化合物CHNO,其分子结构略微偏离平面几何形状(通过所有非H原子的平均平面的均方根偏差 = 0.065 Å)。存在分子内N-H⋯O氢键,形成了图集基序(6)的环。在晶体中,分子通过N-H⋯O和C-H⋯O氢键相互作用沿(120)连接成二维网络,并观察到图集基序(8)、(26)和(32)的环。此外, Hirshfeld表面分析表明分子通过C=O⋯相互作用沿[100]堆积,并表明对晶体结构最重要的贡献是O⋯H(28.5%)和H⋯H(26.7%)相互作用。对标题化合物与二氢叶酸还原酶(DHFR)进行了评估。异吲哚酮腙衍生物与所选酶的活性位点显示出N-H⋯O()、N-H⋯O()和⋯()相互作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/009e6166d8b8/e-73-00168-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/509036d0c321/e-73-00168-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/2779d6fe4831/e-73-00168-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/28cdfce67177/e-73-00168-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/2e6e4189711a/e-73-00168-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/c535e29c23a4/e-73-00168-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/93309e0246fd/e-73-00168-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/009e6166d8b8/e-73-00168-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/509036d0c321/e-73-00168-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/2779d6fe4831/e-73-00168-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/28cdfce67177/e-73-00168-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/2e6e4189711a/e-73-00168-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/c535e29c23a4/e-73-00168-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/93309e0246fd/e-73-00168-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a6ff/5290558/009e6166d8b8/e-73-00168-fig7.jpg

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