Keramati Malihe, Aslani Mohammad Mehdi, Khatami Shohreh, Roohvand Farzin
Pilot of Nano-biotechnology Department, Pasteur Institute of Iran, Tehran, Iran.
Microbiology Department, Pasteur Institute of Iran, Tehran, Iran.
Biotechnol Lett. 2017 Jun;39(6):889-895. doi: 10.1007/s10529-017-2310-9. Epub 2017 Feb 28.
To gain insights on the degree of heterogeneity and kinetic differences of streptokinase (SK) from group G (SKG) Streptococci compared with standard SK from group C (SKC) and identification of potentially contributing critical residues (hotspots).
DNA and sequencing analyses confirmed the proper construction of all SK encoding vectors (two SKGs and one standard SKC). SDS-PAGE and western blot analyses confirmed the expression and proper purification of the recombinant SKs from E.coli with the expected size of 47 kDa. Kinetic analyses of two SKGs, compared with SKC, showed higher levels of specific [(×10 IU/mg) of 725 and 715 vs. 536] and fibrin-dependent proteolytic activities [Kcat/K (min/µM) of 37 and 30 vs. 23], accompanied by declined fibrin-independent amidolytic activities [Kcat/K (min/mM) of 109 and 84 vs. 113], respectively. Sequence alignments identified 10 novel residual substitutions scattered in SKα (I33F, R45Q, SKG132, A47D, and G55 N), SKβ (N228 K, F287I), and SKγ domains (L335 V, V396A, T403S) of SKGs, as potential hotspots.
The residue substitutions identified might critically contribute as hot spots to different kinetic parameters of SKGs and might assist in further elucidation of structure/function relations and rational design of SKs with improved (fibrin-dependent) therapeutic properties.
深入了解G组链球菌来源的链激酶(SKG)与C组标准链激酶(SKC)相比的异质性程度和动力学差异,并鉴定可能起关键作用的残基(热点)。
DNA和测序分析证实了所有SK编码载体(两个SKG和一个标准SKC)构建正确。SDS-PAGE和蛋白质印迹分析证实了重组SKs在大肠杆菌中表达并得到正确纯化,预期大小为47 kDa。与SKC相比,对两种SKG进行的动力学分析显示,其比活性水平更高[(×10 IU/mg)分别为725和715,而SKC为536],且纤维蛋白依赖性蛋白水解活性更高[Kcat/K(min/µM)分别为37和30,而SKC为23],同时纤维蛋白非依赖性酰胺水解活性降低[Kcat/K(min/mM)分别为109和84,而SKC为113]。序列比对在SKG的SKα(I33F、R45Q、SKG132、A47D和G55N)、SKβ(N228K、F287I)和SKγ结构域(L335V、V396A、T403S)中鉴定出10个新的残基取代,作为潜在热点。
鉴定出的残基取代可能作为热点对SKG的不同动力学参数起关键作用,并可能有助于进一步阐明结构/功能关系以及合理设计具有改善(纤维蛋白依赖性)治疗特性的SK。