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()启动子关键元件中核苷酸的功能鉴定

Function Identification of the Nucleotides in Key -Element of () Promoter.

作者信息

Zhou Shumin, Zhang Hongli, Li Ruisha, Hong Qiang, Li Yang, Xia Qunfang, Zhang Wei

机构信息

Lab of Plant Development Biology, School of Life Sciences, Shanghai University Shanghai, China.

出版信息

Front Plant Sci. 2017 Feb 17;8:153. doi: 10.3389/fpls.2017.00153. eCollection 2017.

Abstract

As a core regulatory gene of the anther development, () was expressed in tapetum preferentially. Previous study had confirmed that a "CTCC" sequence within promoter was indispensable for correct expression. However, precise analysis on the function of each nucleotide of this sequence still lacks. Here we employed site mutation assay to identify the function roles of the nucleotides. As a result, the "T" and final "C" of "CTCC" were found essential for the temporal and spatial specificity of expression, whereas the other two "C" nucleotides exhibited substitutable somewhat. The substitutes of two flanking nucleotides of "CTCC," however, hardly affected the normal promoter function, suggesting that the "CTCC" sequence as a whole did meet the standard of a canonical -element by definition. In addition, it was found that as short as 497 bp promoter was sufficient for tissue-specific expression, while longer 505 bp promoter sequence was sufficient for species-specific expression.

摘要

作为花药发育的核心调控基因,()优先在绒毡层中表达。先前的研究已经证实,启动子内的“CTCC”序列对于正确的表达是不可或缺的。然而,对该序列每个核苷酸功能的精确分析仍然缺乏。在这里,我们采用位点突变分析来确定核苷酸的功能作用。结果发现,“CTCC”中的“T”和最后的“C”对于表达的时空特异性至关重要,而另外两个“C”核苷酸在一定程度上表现出可替代性。然而,“CTCC”两侧两个核苷酸的替代几乎不影响正常的启动子功能,这表明“CTCC”序列作为一个整体确实符合典型元件的定义标准。此外,还发现短至497 bp的启动子足以实现组织特异性表达,而更长的505 bp启动子序列足以实现物种特异性表达。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7b2f/5313476/5b2c2ea73fdf/fpls-08-00153-g0001.jpg

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