Michael Esti, Gomila Margarita, Lalucat Jorge, Nitzan Yeshayahu, Pechatnikov Izabella, Cahan Rivka
Department of Chemical Engineering, Ariel University , Ariel, 40700, Israel.
The Mina and Everard Goodman Faculty of Life Sciences, Bar-Ilan University , Ramat-Gan, 52900, Israel.
J Proteome Res. 2017 Apr 7;16(4):1683-1692. doi: 10.1021/acs.jproteome.6b01044. Epub 2017 Mar 9.
The organization and expression of Pseudomonas stutzeri ST-9 genes related to toluene catabolism and porin synthesis was investigated. Toluene-degrading genes were found to be localized in the chromosome close to a phage-type integrase. A regulatory gene and 21 genes related to an aromatics degradation pathway are organized as a putative operon. These proteins are upregulated in the presence of toluene. Fourteen outer membrane proteins were identified as porins in the ST-9 genome. The identified porins showed that the main detected porins are related to the OmpA and OprD superfamilies. The percentage of porins in the outer membrane protein fraction, as determined by mass spectrometry, was 73% and 54% when the cells were cultured with toluene and with glucose, respectively. Upregulation of OmpA and downregulation of OprD occurred in the presence of toluene. A porin fraction (90% OprD) from both cultures was isolated and examined as a toluene uptake system using the liposome-swelling assay. Liposomes were prepared with the porin fraction from a culture that was grown on toluene (T-proteoliposome) or glucose (G-proteoliposome). There was no significant difference in the permeability rate of the different solutes through the T-proteoliposome and the G-proteoliposome.
研究了与甲苯分解代谢和孔蛋白合成相关的施氏假单胞菌ST-9基因的组织和表达。发现甲苯降解基因定位于靠近噬菌体型整合酶的染色体上。一个调控基因和21个与芳香族降解途径相关的基因被组织成一个假定的操纵子。这些蛋白质在甲苯存在时上调。在ST-9基因组中鉴定出14种外膜蛋白为孔蛋白。鉴定出的孔蛋白表明,主要检测到的孔蛋白与OmpA和OprD超家族有关。通过质谱法测定,当细胞分别用甲苯和葡萄糖培养时,外膜蛋白组分中孔蛋白的百分比分别为73%和54%。在甲苯存在时,OmpA上调而OprD下调。从两种培养物中分离出孔蛋白组分(90%为OprD),并使用脂质体膨胀试验作为甲苯摄取系统进行检测。用在甲苯(T-蛋白脂质体)或葡萄糖(G-蛋白脂质体)上生长的培养物中的孔蛋白组分制备脂质体。不同溶质通过T-蛋白脂质体和G-蛋白脂质体的渗透率没有显著差异。