Ayres-Alves Thayana, Cardoso Adauto Lima, Nagamachi Cleusa Yoshiko, Sousa Leandro Melo de, Pieczarka Julio Cesar, Noronha Renata Coelho Rodrigues
1 Laboratório de Citogenética, Centro de Estudos Avançados da Biodiversidade, Instituto de Ciências Biológicas, Universidade Federal do Pará , Belém, Brazil .
2 Laboratório Genômica Integrativa, Departamento de Morfologia, Instituto de Biociências, Universidade Estadual Paulista , Botucatu, Brazil .
Zebrafish. 2017 Jun;14(3):251-260. doi: 10.1089/zeb.2016.1373. Epub 2017 Mar 9.
Loricariidae family comprises the greatest variability of Neotropical catfish species, with more than 800 valid species. This family shows significant chromosomal diversity. Mapping of repetitive DNA sequences can be very useful in exploring such diversity, especially among groups that appear to share a preserved karyotypic macrostructure. We describe the karyotypes of Panaque armbrusteri and Panaqolus sp., as assessed using classical cytogenetic methods. Moreover, we offer a map of their repetitive sequences, including 18S and 5S ribosomal DNAs, the Rex1 and Rex3 retrotransposons, and the Tc1-mariner transposon in P. armbrusteri, Panaqolus sp., Scobinancistrus aureatus, and Scobinancistrus pariolispos. Those species share chromosome numbers of 2n = 52, but are divergent in their chromosome structures and the distributions of their repetitive DNA sequences. In situ hybridization with 18S and 5S rDNA probes confirms chromosome location in different pairs; in Panaqolus sp. these sites are in synteny. This multigene family organization can be explained by the occurrence of chromosome rearrangements, and possible events, such as transposition and unequal crossing-over. Rex1 and Rex3 retrotransposons and the Tc1-mariner transposon appeared predominantly dispersed and in small clusters in some chromosome regions. These data emphasize the importance of repetitive sequences in promoting the karyotypic evolution of these species.
甲鲶科包含新热带区鲶鱼物种中最大的变异性,有超过800个有效物种。该科显示出显著的染色体多样性。重复DNA序列的图谱绘制在探索这种多样性方面可能非常有用,特别是在那些似乎共享保守核型宏观结构的群体中。我们描述了使用经典细胞遗传学方法评估的阿姆氏半齿甲鲶和某半齿甲鲶属物种的核型。此外,我们提供了它们重复序列的图谱,包括18S和5S核糖体DNA、Rex1和Rex3逆转录转座子,以及阿姆氏半齿甲鲶、某半齿甲鲶属物种、金色铲吻油鲶和帕氏铲吻油鲶中的Tc1-水手转座子。这些物种的染色体数目均为2n = 52,但它们的染色体结构和重复DNA序列的分布存在差异。用18S和5S rDNA探针进行原位杂交证实了不同染色体对中的定位;在某半齿甲鲶属物种中,这些位点是同线的。这种多基因家族组织可以通过染色体重排以及转座和不等交换等可能事件来解释。Rex1和Rex3逆转录转座子以及Tc1-水手转座子主要呈分散状且在某些染色体区域成小簇出现。这些数据强调了重复序列在促进这些物种核型进化中的重要性。