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输血依赖型沙特β地中海贫血患者基因间区域HbF增强子单倍型的存在情况。

Existence of HbF Enhancer Haplotypes at Intergenic Region in Transfusion-Dependent Saudi -Thalassemia Patients.

作者信息

Cyrus Cyril, Vatte Chittibabu, Borgio J Francis, Al-Rubaish Abdullah, Chathoth Shahanas, Nasserullah Zaki A, Jarrash Sana Al, Sulaiman Ahmed, Qutub Hatem, Alsaleem Hassan, Alzahrani Alhusain J, Steinberg Martin H, Ali Amein K Al

机构信息

Department of Genetic Research, Institute for Research and Medical Consultation, University of Dammam, Dammam, Saudi Arabia.

King Fahd Hospital of the University, University of Dammam, Dammam, Saudi Arabia.

出版信息

Biomed Res Int. 2017;2017:1972429. doi: 10.1155/2017/1972429. Epub 2017 Feb 9.

Abstract

. -Thalassemia and sickle cell disease are genetic disorders characterized by reduced and abnormal -globin chain production, respectively. The elevation of fetal hemoglobin (HbF) can ameliorate the severity of these disorders. In sickle cell disease patients, the HbF level elevation is associated with three quantitative trait loci (QTLs), , 2 promoter, and intergenic region. This study elucidates the existence of the variants in these three QTLs to determine their association with HbF levels of transfusion-dependent Saudi -thalassemia patients. . A total of 174 transfusion-dependent -thalassemia patients and 164 healthy controls from Eastern Province of Saudi Arabia were genotyped for fourteen single nucleotide polymorphisms (SNPs) from the three QTL regions using TaqMan assay on real-time PCR. . Genotype analysis revealed that six alleles of QTL (rs9376090C = 0.0009, rs9399137C = 0.008, rs4895441G = 0.004, rs9389269C = 0.008, rs9402686A = 0.008, and rs9494142C = 0.002) were predominantly associated with -thalassemia. In addition, haplotype analysis revealed that haplotypes of (GCCGCAC = 0.022) and 2 (GTT = 0.009) were also predominantly associated with -thalassemia. Furthermore, the region also exhibited association with the high HbF cohort. . The stimulation of HbF gene expression may provide alternative therapies for the amelioration of the disease severity of -thalassemia.

摘要

β地中海贫血和镰状细胞病是分别以β珠蛋白链生成减少和异常为特征的遗传性疾病。胎儿血红蛋白(HbF)水平升高可改善这些疾病的严重程度。在镰状细胞病患者中,HbF水平升高与三个数量性状基因座(QTL)相关,即BCL11A、β2启动子和HBS1L-MYB基因间区域。本研究阐明这三个QTL中变异的存在,以确定它们与依赖输血的沙特β地中海贫血患者HbF水平的关联。对来自沙特阿拉伯东部省的174例依赖输血的β地中海贫血患者和164名健康对照,使用实时PCR的TaqMan分析对三个QTL区域的14个单核苷酸多态性(SNP)进行基因分型。基因型分析显示,BCL11A QTL的六个等位基因(rs9376090C = 0.0009、rs9399137C = 0.008、rs4895441G = 0.004、rs9389269C = 0.008、rs9402686A = 0.008和rs9494142C = 0.002)主要与β地中海贫血相关。此外,单倍型分析显示,BCL11A(GCCGCAC = 0.022)和β2(GTT = 0.009)的单倍型也主要与β地中海贫血相关。此外,HBS1L-MYB区域也与高HbF队列相关。刺激HbF基因表达可能为改善β地中海贫血的疾病严重程度提供替代疗法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/039c/5322420/9663ba097b36/BMRI2017-1972429.001.jpg

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