Alonso-Pernas Pol, Arias-Cordero Erika, Novoselov Alexey, Ebert Christina, Rybak Jürgen, Kaltenpoth Martin, Westermann Martin, Neugebauer Ute, Boland Wilhelm
Department of Bioorganic Chemistry, Max Planck Institute for Chemical Ecology Jena, Germany.
Center for Sepsis Control and Care, Jena University HospitalJena, Germany; Leibniz Institute of Photonic TechnologyJena, Germany.
Front Microbiol. 2017 Feb 28;8:291. doi: 10.3389/fmicb.2017.00291. eCollection 2017.
A characterization of the bacterial community of the hindgut wall of two larval and the adult stages of the forest cockchafer () was carried out using amplicon sequencing of the 16S rRNA gene fragment. We found that, in second-instar larvae, Caulobacteraceae and Pseudomonadaceae showed the highest relative abundances, while in third-instar larvae, the dominant families were Porphyromonadaceae and Bacteroidales-related. In adults, an increase of the relative abundance of Bacteroidetes, Proteobacteria (γ- and δ- classes) and the family Enterococcaceae (Firmicutes) was observed. This suggests that the composition of the hindgut wall community may depend on the insect's life stage. Additionally, specialized bacterial niches hitherto very poorly described in the literature were spotted at both sides of the distal part of the hindgut chamber. We named these structures "pockets." Amplicon sequencing of the 16S rRNA gene fragment revealed that the pockets contained a different bacterial community than the surrounding hindgut wall, dominated by Alcaligenaceae and Micrococcaceae-related families. Poly-β-hydroxybutyrate (PHB) accumulation in the pocket was suggested in isolated sp. by Nile Blue staining, and confirmed by gas chromatography-mass spectrometry analysis (GC-MS) on cultured bacterial mass and whole pocket tissue. Raman micro-spectroscopy allowed to visualize the spatial distribution of PHB accumulating bacteria within the pocket tissue. The presence of this polymer might play a role in the colonization of these specialized niches.
利用16S rRNA基因片段的扩增子测序对森林金龟子两个幼虫阶段和成虫阶段后肠壁的细菌群落进行了特征分析。我们发现,在二龄幼虫中,柄杆菌科和假单胞菌科的相对丰度最高,而在三龄幼虫中,优势菌科是卟啉单胞菌科和拟杆菌目相关菌科。在成虫中,观察到拟杆菌门、变形菌门(γ-和δ-亚类)以及肠球菌科(厚壁菌门)的相对丰度增加。这表明后肠壁群落的组成可能取决于昆虫的生命阶段。此外,在文献中迄今描述甚少的特殊细菌生态位在后肠腔远端两侧被发现。我们将这些结构命名为“囊袋”。16S rRNA基因片段的扩增子测序显示,囊袋中所含细菌群落与周围后肠壁不同,以产碱菌科和微球菌科相关菌科为主。通过尼罗蓝染色在分离出的[具体菌种]中发现了囊袋中聚-β-羟基丁酸酯(PHB)的积累,并通过对培养细菌团块和整个囊袋组织的气相色谱-质谱分析(GC-MS)得到了证实。拉曼显微光谱能够可视化囊袋组织内积累PHB的细菌的空间分布。这种聚合物的存在可能在这些特殊生态位的定殖中发挥作用。