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中国野生家鸽中1型鸽疱疹病毒的全基因组序列及进化分析

Complete genome sequence and evolution analysis of a columbid herpesvirus type 1 from feral pigeon in China.

作者信息

Guo Ying, Li Siwen, Sun Xiao, He Ying, Zhao Hongjing, Wang Yu, Zhao Panpan, Xing Mingwei

机构信息

College of Wildlife Resources, Northeast Forestry University, Harbin, 150040, Heilongjiang, China.

出版信息

Arch Virol. 2017 Jul;162(7):2131-2133. doi: 10.1007/s00705-017-3329-x. Epub 2017 Mar 18.

DOI:10.1007/s00705-017-3329-x
PMID:28316016
Abstract

Here, we report the genome sequence of a feral pigeon alphaherpesvirus (columbid herpesvirus type 1, CoHV-1), strain HLJ, and compare it with other avian alphaherpesviruses. The CoHV-1 strain HLJ genome is 204,237 bp in length and encodes approximately 130 putative protein-coding genes. Phylogenetically, CoHV-1 complete genome resides in a monophyletic group with the falconid herpesvirus type 1 (FaHV-1) genome, distant from other alphaherpesviruses. Interestingly, the evolutionary analysis of partial genes of CoHV-1 isolated from different organisms and areas (currently accessible on GenBank) indicates that the CoHV-1 HLJ strain isolated from pigeon (Columba livia) is closely related to the strains isolated from peregrine falcon (Falco peregrinus) in Poland and owl (Bubo virginianus) in USA. These results may suggest possible transmission of the virus between different organisms and different geographic areas.

摘要

在此,我们报告了一株野生家鸽α疱疹病毒(鸽疱疹病毒1型,CoHV-1)HLJ株的基因组序列,并将其与其他禽α疱疹病毒进行比较。CoHV-1 HLJ株基因组长度为204,237 bp,编码约130个推定的蛋白质编码基因。在系统发育上,CoHV-1完整基因组与隼疱疹病毒1型(FaHV-1)基因组处于一个单系群中,与其他α疱疹病毒距离较远。有趣的是,对从不同生物体和地区分离的CoHV-1部分基因(目前可在GenBank上获取)的进化分析表明,从家鸽(Columba livia)分离的CoHV-1 HLJ株与从波兰的矛隼(Falco peregrinus)和美国的雕鸮(Bubo virginianus)分离的毒株密切相关。这些结果可能表明该病毒在不同生物体和不同地理区域之间可能存在传播。

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