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生物膜的形成使自由生活的固氮根际细菌能够在有氧条件下固氮。

Biofilm formation enables free-living nitrogen-fixing rhizobacteria to fix nitrogen under aerobic conditions.

作者信息

Wang Di, Xu Anming, Elmerich Claudine, Ma Luyan Z

机构信息

State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

ISME J. 2017 Jul;11(7):1602-1613. doi: 10.1038/ismej.2017.30. Epub 2017 Mar 24.

DOI:10.1038/ismej.2017.30
PMID:28338674
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5520150/
Abstract

The multicellular communities of microorganisms known as biofilms are of high significance in agricultural setting, yet it is largely unknown about the biofilm formed by nitrogen-fixing bacteria. Here we report the biofilm formation by Pseudomonas stutzeri A1501, a free-living rhizospheric bacterium, capable of fixing nitrogen under microaerobic and nitrogen-limiting conditions. P. stutzeri A1501 tended to form biofilm in minimal media, especially under nitrogen depletion condition. Under such growth condition, the biofilms formed at the air-liquid interface (termed as pellicles) and the colony biofilms on agar plates exhibited nitrogenase activity in air. The two kinds of biofilms both contained large ovoid shape 'cells' that were multiple living bacteria embedded in a sac of extracellular polymeric substances (EPSs). We proposed to name such large 'cells' as A1501 cyst. Our results suggest that the EPS, especially exopolysaccharides enabled the encased bacteria to fix nitrogen while grown under aerobic condition. The formation of A1501 cysts was reversible in response to the changes of carbon or nitrogen source status. A1501 cyst formation depended on nitrogen-limiting signaling and the presence of sufficient carbon sources, yet was independent of an active nitrogenase. The pellicles formed by Azospirillum brasilense, another free-living nitrogen-fixing rhizobacterium, which also exhibited nitrogenase activity and contained the large EPS-encapsuled A1501 cyst-like 'cells'. Our data imply that free-living nitrogen-fixing bacteria could convert the easy-used carbon sources to exopolysaccharides in order to enable nitrogen fixation in a natural aerobic environment.

摘要

被称为生物膜的微生物多细胞群落在农业环境中具有重要意义,但关于固氮细菌形成的生物膜却知之甚少。在此,我们报道了施氏假单胞菌A1501形成生物膜的情况,它是一种自由生活的根际细菌,能够在微需氧和氮限制条件下固氮。施氏假单胞菌A1501倾向于在基本培养基中形成生物膜,尤其是在氮耗尽的条件下。在这种生长条件下,在气液界面形成的生物膜(称为菌膜)和琼脂平板上的菌落生物膜在空气中表现出固氮酶活性。这两种生物膜都含有大的卵形“细胞”,这些“细胞”是多个活细菌嵌入胞外聚合物(EPS)囊中形成的。我们提议将这种大的“细胞”命名为A1501孢囊。我们的结果表明,EPS,尤其是胞外多糖能够使被包裹的细菌在有氧条件下生长时固氮。A1501孢囊的形成会随着碳源或氮源状态的变化而可逆。A1501孢囊的形成依赖于氮限制信号和充足碳源的存在,但与活性固氮酶无关。巴西固氮螺菌形成的菌膜也表现出固氮酶活性,并且含有大的EPS包裹的类似A1501孢囊的“细胞”。我们的数据表明,自由生活的固氮细菌可以将易利用的碳源转化为胞外多糖,以便在自然有氧环境中进行固氮。

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ISME J. 2017 Jan;11(1):166-175. doi: 10.1038/ismej.2016.97. Epub 2016 Oct 14.
2
The Role of the ncRNA RgsA in the Oxidative Stress Response and Biofilm Formation in Azotobacter vinelandii.ncRNA RgsA 在土壤固氮菌氧化应激反应和生物膜形成中的作用。
Curr Microbiol. 2016 Jun;72(6):671-9. doi: 10.1007/s00284-016-1003-2. Epub 2016 Feb 9.
3
Biofilm formation by Bacillus subtilis requires an endoribonuclease-containing multisubunit complex that controls mRNA levels for the matrix gene repressor SinR.枯草芽孢杆菌形成生物膜需要一种含有内切核糖核酸酶的多亚基复合物,该复合物可控制基质基因阻遏物SinR的mRNA水平。
Mol Microbiol. 2016 Jan;99(2):425-37. doi: 10.1111/mmi.13240. Epub 2015 Oct 26.
4
The Emergence of 2-Oxoglutarate as a Master Regulator Metabolite.2-氧代戊二酸作为主要调节代谢物的出现。
Microbiol Mol Biol Rev. 2015 Dec;79(4):419-35. doi: 10.1128/MMBR.00038-15.
5
Metabolic adaptations of Azospirillum brasilense to oxygen stress by cell-to-cell clumping and flocculation.巴西固氮螺菌通过细胞间聚集和絮凝对氧胁迫的代谢适应。
Appl Environ Microbiol. 2015 Dec;81(24):8346-57. doi: 10.1128/AEM.02782-15. Epub 2015 Sep 25.
6
Reconstruction and minimal gene requirements for the alternative iron-only nitrogenase in Escherichia coli.大肠杆菌中替代性仅含铁固氮酶的重建及最小基因需求
Proc Natl Acad Sci U S A. 2014 Sep 2;111(35):E3718-25. doi: 10.1073/pnas.1411185111. Epub 2014 Aug 19.
7
Sticking together: building a biofilm the Bacillus subtilis way.黏附在一起:构建枯草芽孢杆菌生物膜的方式。
Nat Rev Microbiol. 2013 Mar;11(3):157-68. doi: 10.1038/nrmicro2960. Epub 2013 Jan 28.
8
Radical SAM-dependent carbon insertion into the nitrogenase M-cluster.基于自由基S-腺苷甲硫氨酸的碳插入固氮酶M簇反应。
Science. 2012 Sep 28;337(6102):1672-5. doi: 10.1126/science.1224603.
9
Reversible control of biofilm formation by Cellulomonas spp. in response to nitrogen availability.可根据氮素供应情况,通过纤维单胞菌属来实现生物膜形成的可逆控制。
Environ Microbiol. 2012 Mar;14(3):594-604. doi: 10.1111/j.1462-2920.2011.02596.x. Epub 2011 Sep 27.
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Exopolysaccharide production is required for biofilm formation and plant colonization by the nitrogen-fixing endophyte Gluconacetobacter diazotrophicus.生物膜的形成和固氮内生菌 Gluconacetobacter diazotrophicus 对植物的定殖都需要外多糖的产生。
Mol Plant Microbe Interact. 2011 Dec;24(12):1448-58. doi: 10.1094/MPMI-05-11-0127.