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低评分正常胚胎和来亨鸡胚胎成肌过程中的转录比较。

Transcriptional comparison of myogenesis in leghorn and low score normal embryos.

出版信息

Poult Sci. 2017 Jun 1;96(6):1531-1543. doi: 10.3382/ps/pew452.

Abstract

In a previous study, we reported on a quantitative transcriptomic method which confirmed the temporal transcription of developmental fast skeletal muscle myosin heavy chain (fsMyHC) embryonic isoforms in the embryonic Pectoralis major (PM) of the Single Comb White Leghorn (SCWL). The objective of the current study was to further investigate the transcriptional events underlying embryonic PM growth in the SCWL and a genotype exhibiting partial muscular dystrophy, the Low Score Normal (LSN). We hypothesized that within the SCWL and LSN embryos, there would be differences in the temporal transcription of the fsMyHC isoforms and other myogenic regulatory genes. Samples of PM tissues were collected daily from embryonic day (ED) 6 through ED19. Total RNA was isolated from each PM tissue sample and mRNA transcripts from 28 target genes were simultaneously quantified using a probe hybridization method. Raw data counts were normalized against the geometric mean of 5 housekeeping genes and analyzed using Local Regression (LOESS) smoothing methods. Predicted estimates based on LOESS smoothing were plotted with 95% upper and lower confidence intervals, allowing for line comparisons between the SCWL and LSN. Differences (P < 0.05) were determined by non-overlapping confidence intervals between the SCWL and LSN. Among genes exhibiting line differences (P < 0.05), were the developmental fsMyHC isoforms, transcription factors, growth factors, and proteoglycans. The current study is the first to report transcription of the chicken fast skeletal adult myosin isoform (Cad) during PM myogenesis. Samples were submitted for capillary-liquid chromatography-tandem mass spectrometry analysis which confirmed the translation of all the developmental fsMyHC isoforms including Cad in both lines. The LSN exhibited altered transcription patterns of early myogenic markers (MYOD, MRF4, Cemb1, six4, and pax3) during late embryogenesis, continued transcription of Cvent, and delayed transcription of Cneo.

摘要

在之前的研究中,我们报告了一种定量转录组学方法,该方法证实了发育快速骨骼肌肌球蛋白重链 (fsMyHC) 胚胎同工型在单羽白来航鸡 (SCWL) 的胸大肌 (PM) 中的时间转录。本研究的目的是进一步研究 SCWL 和表现出部分肌肉营养不良的低评分正常 (LSN) 基因型中 PM 胚胎生长的转录事件。我们假设在 SCWL 和 LSN 胚胎中,fsMyHC 同工型和其他肌生成调节基因的时间转录会存在差异。从胚胎第 6 天 (ED) 到第 19 天 (ED) ,每天从 PM 组织样本中收集组织样本。从每个 PM 组织样本中分离总 RNA,并使用探针杂交法同时定量 28 个靶基因的 mRNA 转录物。原始数据计数与 5 个管家基因的几何平均值进行归一化,并使用局部回归 (LOESS) 平滑方法进行分析。基于 LOESS 平滑的预测估计值与 95%置信区间的上限和下限一起绘制,允许在 SCWL 和 LSN 之间进行线条比较。通过 SCWL 和 LSN 之间不重叠的置信区间确定差异 (P < 0.05)。在表现出线差异的基因中 (P < 0.05) ,包括发育快速骨骼肌同工型、转录因子、生长因子和蛋白聚糖。本研究首次报道了鸡快速骨骼肌成人肌球蛋白同工型 (Cad) 在 PM 肌发生过程中的转录。对样本进行毛细管液相色谱-串联质谱分析,结果证实了两条线均翻译了所有发育快速骨骼肌同工型,包括 Cad。LSN 在胚胎后期表现出早期肌生成标记物 (MYOD、MRF4、Cemb1、six4 和 pax3) 的转录模式改变,Cvent 的转录持续,Cneo 的转录延迟。

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