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基于多变量曲线分辨法的非靶向分配和代谢组学氢核磁共振数据集的自动整合。

Untargeted assignment and automatic integration of H NMR metabolomic datasets using a multivariate curve resolution approach.

机构信息

Department of Environmental Chemistry, Institute of Environmental Assessment and Water Research (IDAEA-CSIC), Barcelona, Spain.

Department of Biological Chemistry and Molecular Modelling, Institute of Advanced Chemistry of Catalonia (IQAC-CSIC), Barcelona, Spain.

出版信息

Anal Chim Acta. 2017 Apr 29;964:55-66. doi: 10.1016/j.aca.2017.02.010. Epub 2017 Feb 20.

Abstract

In this article, we propose the use of the Multivariate Curve Resolution - Alternating Least Squares (MCR-ALS) chemometrics method to resolve the H NMR spectra and concentration of the individual metabolites in their mixtures in untargeted metabolomics studies. A decision tree-based strategy is presented to optimally select and implement spectra estimates and equality constraints during MCR-ALS optimization. The proposed method has been satisfactorily evaluated using different H NMR metabolomics datasets. In a first study, H NMR spectra of the metabolites in a simulated mixture were successfully recovered and assigned. In a second study, more than 30 metabolites were characterized and quantified from an experimental unknown mixture analyzed by H NMR. In this work, MCR-ALS is shown to be a convenient tool for metabolite investigation and sample screening using H NMR, and it opens a new path for performing metabolomics studies with this chemometric technique.

摘要

在本文中,我们提出使用多元曲线分辨-交替最小二乘法(MCR-ALS)化学计量学方法解析靶向代谢组学研究中混合物中各代谢物的 H NMR 光谱和浓度。提出了一种基于决策树的策略,用于在 MCR-ALS 优化过程中最优地选择和实施光谱估计和等式约束。该方法使用不同的 H NMR 代谢组学数据集进行了满意的评估。在第一项研究中,成功地恢复和分配了模拟混合物中代谢物的 H NMR 光谱。在第二项研究中,从通过 H NMR 分析的实验未知混合物中鉴定和定量了 30 多种代谢物。在这项工作中,MCR-ALS 被证明是使用 H NMR 进行代谢物研究和样品筛选的便捷工具,并且为使用这种化学计量技术进行代谢组学研究开辟了新的途径。

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