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泰国感染葫芦科作物和杂草植物的粉虱传双生病毒的发病率和分子多样性。

Incidence and molecular diversity of poleroviruses infecting cucurbit crops and weed plants in Thailand.

作者信息

Cheewachaiwit S, Warin N, Phuangrat B, Rukpratanporn S, Gajanandana O, Balatero C H, Chatchawankanphanich O

机构信息

Center for Agricultural Biotechnology, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom, 73140, Thailand.

Center of Excellence on Agricultural Biotechnology: (AG-BIO/PERDO-CHE), Bangkok, 10900, Thailand.

出版信息

Arch Virol. 2017 Jul;162(7):2083-2090. doi: 10.1007/s00705-017-3332-2. Epub 2017 Mar 28.

DOI:10.1007/s00705-017-3332-2
PMID:28352973
Abstract

Overall, 244 samples of cucurbit crops with yellowing symptoms and selected weed species, from 15 provinces in Thailand, were screened by RT-PCR using primers Polero-CP-F and Polero-CP-R. A total of 160 samples (~66%) were infected by poleroviruses. Analysis of a 1.4 kb region covering the 3' RNA-dependent RNA polymerase (RdRp) gene, the intergenic non-coding region (iNCR), and the coat protein (CP), showed that four poleroviruses, namely, cucurbit aphid-borne yellows virus (CABYV), luffa aphid-borne yellows virus (LABYV), melon aphid-borne yellows virus (MABYV) and suakwa aphid-borne yellows virus (SABYV) were associated with the yellowing symptoms in cucurbit crops. Further analyses indicated presence of putative recombinant viruses referred to as CABYV-R and SABYV-R. CABYV-R was derived from the recombination between MABYV and the common strain of CABYV (CABYV-C). SABYV-R was derived from the recombination of MABYV and SABYV.

摘要

总体而言,使用引物Polero-CP-F和Polero-CP-R,通过RT-PCR对来自泰国15个省份的244份有黄化症状的葫芦科作物样本和选定的杂草物种进行了筛查。共有160份样本(约66%)感染了粉虱传双生病毒。对一个覆盖3' RNA依赖性RNA聚合酶(RdRp)基因、基因间非编码区(iNCR)和外壳蛋白(CP)的1.4 kb区域的分析表明,四种粉虱传双生病毒,即葫芦蚜传黄化病毒(CABYV)、丝瓜蚜传黄化病毒(LABYV)、甜瓜蚜传黄化病毒(MABYV)和瓠瓜蚜传黄化病毒(SABYV)与葫芦科作物的黄化症状有关。进一步分析表明存在被称为CABYV-R和SABYV-R的推定重组病毒。CABYV-R源自MABYV和CABYV常见株系(CABYV-C)之间的重组。SABYV-R源自MABYV和SABYV的重组。

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