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T3.37和S5.46在多巴胺D1受体激活机制中的功能作用。

Functional roles of T3.37 and S5.46 in the activation mechanism of the dopamine D1 receptor.

作者信息

Hugo Estefanía A, Cassels Bruce K, Fierro Angélica

机构信息

Department of Chemistry, Faculty of Sciences, University of Chile, Ñuñoa, 7750000, Santiago, Chile.

Departamento de Química Orgánica, Facultad de Química, Pontificia Universidad Católica de Chile, Macul, 7810003, Santiago, Chile.

出版信息

J Mol Model. 2017 Apr;23(4):142. doi: 10.1007/s00894-017-3313-0. Epub 2017 Mar 31.

Abstract

The activation mechanism of dopamine receptors is unknown. The amino acids S5.42, S5.43, and S5.46 located in helix 5 appear to be crucial, but their specific roles in receptor activation have not been studied. We modeled the D1 dopamine receptor using the crystal structures of the D3 dopamine and β2 adrenergic receptors. Molecular dynamics simulations show that the interaction of dopamine with the D1 receptor leads to the formation of a hydrogen-bond network with its catechol group and helices 3, 5, and 6, including water molecules. The para hydroxyl group of dopamine binds directly to S5.42 and N6.55, the latter also interacting with S5.43. Unexpectedly, S5.46 does not interact directly with the catechol; instead, it interacts through a water molecule with S5.42 and directly with T3.37. The formation of this hydrogen-bond network, part of which was previously observed in docking studies with dopamine agonists, triggers the opening of the E6.30-R3.60 ionic lock associated with the activation of GPCRs. These changes do not occur in the unbonded (apo) receptor or when it is in a complex with the antagonist 3-methoxy-5,6,7,8,9,14-hexahydrodibenz[d,g]azecine. Our results provide valuable insight into the T3.37-S5.46-water-S5.43-ligand interaction, which may be crucial to the activation of the D1 dopamine receptor and should be considered during the design of novel agonists. Graphical Abstract General representation of the relationship between the formation of the HBN and the opening of the R3.50-E6.30 ionic lock.

摘要

多巴胺受体的激活机制尚不清楚。位于螺旋5的氨基酸S5.42、S5.43和S5.46似乎至关重要,但其在受体激活中的具体作用尚未得到研究。我们利用D3多巴胺受体和β2肾上腺素能受体的晶体结构对D1多巴胺受体进行建模。分子动力学模拟表明,多巴胺与D1受体的相互作用导致其儿茶酚基团与螺旋3、5和6形成氢键网络,其中包括水分子。多巴胺的对羟基直接与S5.42和N6.55结合,后者也与S5.43相互作用。出乎意料的是,S5.46并不直接与儿茶酚相互作用;相反,它通过一个水分子与S5.42相互作用,并直接与T3.37相互作用。这种氢键网络的形成,其中一部分先前在与多巴胺激动剂的对接研究中观察到,触发了与GPCR激活相关的E6.30-R3.60离子锁的打开。这些变化在未结合(无配体)的受体中或其与拮抗剂3-甲氧基-5,6,7,8,9,14-六氢二苯并[d,g]氮杂环庚烷形成复合物时不会发生。我们的结果为T3.37-S5.46-水-S5.43-配体相互作用提供了有价值的见解,这可能对D1多巴胺受体的激活至关重要,在新型激动剂的设计过程中应予以考虑。图形摘要 HBN的形成与R3.50-E6.30离子锁打开之间关系的一般表示。

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