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基于核空间和光谱特征的组织病理学中脑膜瘤亚型分类进化方法

Nuclear spatial and spectral features based evolutionary method for meningioma subtypes classification in histopathology.

作者信息

Fatima Kiran, Majeed Hammad, Irshad Humayun

机构信息

Department of Computer Science, National University of Computer and Emerging Sciences, A. K. Brohi Road, H-11/4, Islamabad, Pakistan.

Department of Pathology, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts.

出版信息

Microsc Res Tech. 2017 Aug;80(8):851-861. doi: 10.1002/jemt.22874. Epub 2017 Apr 5.

Abstract

Meningioma subtypes classification is a real-world multiclass problem from the realm of neuropathology. The major challenge in solving this problem is the inherent complexity due to high intra-class variability and low inter-class variation in tissue samples. The development of computational methods to assist pathologists in characterization of these tissue samples would have great diagnostic and prognostic value. In this article, we proposed an optimized evolutionary framework for the classification of benign meningioma into four subtypes. This framework investigates the imperative role of RGB color channels for discrimination of tumor subtypes and compute structural, statistical and spectral phenotypes. An evolutionary technique, Genetic Algorithm, in combination with Support Vector Machine is applied to tune classifier parameters and to select the best possible combination of extracted phenotypes that improved the classification accuracy (94.88%) on meningioma histology dataset, provided by the Institute of Neuropathology, Bielefeld. These statistics show that computational framework can robustly discriminate four subtypes of benign meningioma and may aid pathologists in the diagnosis and classification of these lesions.

摘要

脑膜瘤亚型分类是神经病理学领域一个实际的多类问题。解决这个问题的主要挑战在于组织样本中存在的高类内变异性和低类间变异性所带来的固有复杂性。开发计算方法以协助病理学家对这些组织样本进行特征描述将具有巨大的诊断和预后价值。在本文中,我们提出了一个优化的进化框架,用于将良性脑膜瘤分为四种亚型。该框架研究了RGB颜色通道在区分肿瘤亚型方面的重要作用,并计算结构、统计和光谱表型。一种进化技术——遗传算法,与支持向量机相结合,用于调整分类器参数,并选择提取的表型的最佳可能组合,这提高了由比勒费尔德神经病理学研究所提供的脑膜瘤组织学数据集上的分类准确率(94.88%)。这些统计数据表明,计算框架能够可靠地区分良性脑膜瘤的四种亚型,并可能有助于病理学家对这些病变进行诊断和分类。

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