Kelly S Thomas, Spencer Hamish G
Department of Zoology, University of Otago, 340 Great King Street, Dunedin, New Zealand.
Department of Zoology, University of Otago, 340 Great King Street, Dunedin, New Zealand.
Theor Popul Biol. 2017 Jun;115:35-44. doi: 10.1016/j.tpb.2017.03.004. Epub 2017 Apr 5.
Genomic imprinting is a form of epigenetic modification involving parent-of-origin-dependent gene expression, usually the inactivation of one gene copy in some tissues, at least, for some part of the diploid life cycle. Occurring at a number of loci in mammals and flowering plants, this mode of non-Mendelian expression can be viewed more generally as parentally-specific differential gene expression. The effects of natural selection on genetic variation at imprinted loci have previously been examined in a several population-genetic models. Here we expand the existing one-locus, two-allele population-genetic models of viability selection with genomic imprinting to include sex-limited imprinting, i.e., imprinted expression occurring only in one sex, and differential viability between the sexes. We first consider models of complete inactivation of either parental allele and these models are subsequently generalized to incorporate differential expression. Stable polymorphic equilibrium was possible without heterozygote advantage as observed in some prior models of imprinting in both sexes. In contrast to these latter models, in the sex-limited case it was critical whether the paternally inherited or maternally inherited allele was inactivated. The parental origin of inactivated alleles had a different impact on how the population responded to the different selection pressures between the sexes. Under the same fitness parameters, imprinting in the other sex altered the number of possible equilibrium states and their stability. When the parental origin of imprinted alleles and the sex in which they are inactive differ, an allele cannot be inactivated in consecutive generations. The system dynamics became more complex with more equilibrium points emerging. Our results show that selection can interact with epigenetic factors to maintain genetic variation in previously unanticipated ways.
基因组印记是一种表观遗传修饰形式,涉及基因表达的亲本来源依赖性,通常在二倍体生命周期的某些阶段,至少在某些组织中,一个基因拷贝会发生失活。这种非孟德尔式表达模式在哺乳动物和开花植物的多个基因座上都有发生,更普遍地可以看作是亲本特异性的差异基因表达。此前,在一些群体遗传模型中研究了自然选择对印记基因座遗传变异的影响。在这里,我们将现有的具有基因组印记的单基因座、双等位基因生存力选择群体遗传模型进行扩展,以纳入性别受限印记,即印记表达仅发生在一个性别中,以及两性之间的不同生存力。我们首先考虑亲本等位基因完全失活的模型,随后将这些模型进行推广以纳入差异表达。如在一些先前的两性印记模型中所观察到的,在没有杂合子优势的情况下,稳定的多态平衡是可能的。与这些后一种模型不同,在性别受限的情况下,父本遗传或母本遗传的等位基因是否失活至关重要。失活等位基因的亲本来源对群体如何应对两性之间不同的选择压力有不同的影响。在相同的适合度参数下,另一性别的印记改变了可能的平衡状态数量及其稳定性。当印记等位基因的亲本来源及其失活的性别不同时,一个等位基因不能在连续几代中失活。系统动力学变得更加复杂,出现了更多的平衡点。我们的结果表明,选择可以与表观遗传因素相互作用,以以前未预料到的方式维持遗传变异。