Xing Zheng, Wang Siwen, Tran Elizabeth J
Department of Biochemistry, Purdue University, West Lafayette, Indiana 47906, USA.
Purdue Center for Cancer Research, Purdue University, West Lafayette, Indiana 47906, USA.
RNA. 2017 Jul;23(7):1125-1138. doi: 10.1261/rna.060335.116. Epub 2017 Apr 14.
DEAD-box proteins are a class of nonprocessive RNA helicases that dynamically modulate the structure of RNA and ribonucleoprotein complexes (RNPs). However, the precise roles of individual members are not well understood. Work from our laboratory revealed that the DEAD-box protein Dbp2 in is an active RNA helicase in vitro that functions in transcription by promoting mRNP assembly, repressing cryptic transcription initiation, and regulating long noncoding RNA activity. Interestingly, Dbp2 is also linked to glucose sensing and hexose transporter gene expression. DDX5 is the mammalian ortholog of Dbp2 that has been implicated in cancer and metabolic syndrome, suggesting that the role of Dbp2 and DDX5 in glucose metabolic regulation is conserved. Herein, we present a refined biochemical and biological comparison of yeast Dbp2 and human DDX5 enzymes. We find that human DDX5 possesses a 10-fold higher unwinding activity than Dbp2, which is partially due to the presence of a mammalian/avian specific C-terminal extension. Interestingly, ectopic expression of rescues the cold sensitivity, cryptic initiation defects, and impaired glucose import in Δ cells, suggesting functional conservation. Consistently, we show that DDX5 promotes glucose uptake and glycolysis in mouse AML12 hepatocyte cells, suggesting that mammalian DDX5 and Dbp2 share conserved roles in cellular metabolism.
DEAD盒蛋白是一类非进行性RNA解旋酶,可动态调节RNA和核糖核蛋白复合物(RNP)的结构。然而,单个成员的确切作用尚不清楚。我们实验室的研究表明,酵母中的DEAD盒蛋白Dbp2在体外是一种活性RNA解旋酶,通过促进mRNA-核糖核蛋白复合物组装、抑制隐蔽转录起始和调节长链非编码RNA活性在转录过程中发挥作用。有趣的是,Dbp2还与葡萄糖感应和己糖转运蛋白基因表达有关。DDX5是Dbp2的哺乳动物同源物,与癌症和代谢综合征有关,这表明Dbp2和DDX5在葡萄糖代谢调节中的作用是保守的。在此,我们对酵母Dbp2和人类DDX5酶进行了精细的生化和生物学比较。我们发现,人类DDX5的解旋活性比Dbp2高10倍,这部分归因于哺乳动物/鸟类特有的C末端延伸的存在。有趣的是,异位表达可挽救Δ细胞中的冷敏感性、隐蔽起始缺陷和葡萄糖摄取受损,表明功能保守。一致地,我们表明DDX5促进小鼠AML12肝细胞中的葡萄糖摄取和糖酵解,这表明哺乳动物DDX5和酵母Dbp2在细胞代谢中具有保守作用。