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一种具有组氨酸/半胱氨酸血红素轴向配体和类Per-Arnt-Sim(PAS)结构域的新型蓝藻血红素蛋白的晶体结构和氧化还原性质

Crystal structure and redox properties of a novel cyanobacterial heme protein with a His/Cys heme axial ligation and a Per-Arnt-Sim (PAS)-like domain.

作者信息

Motomura Taiki, Suga Michihiro, Hienerwadel Rainer, Nakagawa Akiko, Lai Thanh-Lan, Nitschke Wolfgang, Kuma Takahiro, Sugiura Miwa, Boussac Alain, Shen Jian-Ren

机构信息

From the Department of Picobiology, Graduate School of Life Science, University of Hyogo, Hyogo 678-1297, Japan.

the Research Institute for Interdisciplinary Science and Graduate School of Natural Science and Technology, Okayama University, Okayama 700-8530, Japan.

出版信息

J Biol Chem. 2017 Jun 9;292(23):9599-9612. doi: 10.1074/jbc.M116.746263. Epub 2017 Apr 20.

Abstract

Photosystem II catalyzes light-induced water oxidation leading to the generation of dioxygen indispensable for sustaining aerobic life on Earth. The Photosystem II reaction center is composed of D1 and D2 proteins encoded by and genes, respectively. In cyanobacteria, different genes are present in the genome. The thermophilic cyanobacterium contains three genes: , , and , and a new -type heme protein, Tll0287, was found to be expressed in a strain expressing the gene only, but the structure and function of Tll0287 are unknown. Here we solved the crystal structure of Tll0287 at a 2.0 Å resolution. The overall structure of Tll0287 was found to be similar to some kinases and sensor proteins with a Per-Arnt-Sim-like domain rather than to other -type cytochromes. The fifth and sixth axial ligands for the heme were Cys and His, instead of the His/Met or His/His ligand pairs observed for most of the -type hemes. The redox potential, , of Tll0287 was -255 ± 20 mV normal hydrogen electrode at pH values above 7.5. Below this pH value, the increased by ≈57 mV/pH unit at 15 °C, suggesting the involvement of a protonatable group with a p = 7.2 ± 0.3. Possible functions of Tll0287 as a redox sensor under microaerobic conditions or a cytochrome subunit of an HS-oxidizing system are discussed in view of the environmental conditions in which is expressed, as well as phylogenetic analysis, structural, and sequence homologies.

摘要

光系统II催化光诱导的水氧化反应,从而产生维持地球上有氧生命所必需的氧气。光系统II反应中心分别由叶绿体基因组中的psbA和psbD基因编码的D1和D2蛋白组成。在蓝细菌中,基因组中存在不同的psbA基因。嗜热蓝细菌Thermosynechococcus elongatus含有三个psbA基因:psbA1、psbA2和psbA3,并且发现一种新型血红素蛋白Tll0287仅在表达psbA3基因的菌株中表达,但其结构和功能尚不清楚。在此,我们解析了Tll0287的晶体结构,分辨率为2.0 Å。结果发现,Tll0287的整体结构与一些具有Per-Arnt-Sim样结构域的激酶和传感蛋白相似,而与其他类型的细胞色素不同。血红素的第五和第六轴向配体是半胱氨酸和组氨酸,而不是大多数类型血红素中观察到的组氨酸/甲硫氨酸或组氨酸/组氨酸配体对。在pH值高于7.5时,Tll0287的氧化还原电位E m为 -255 ± 20 mV(相对于标准氢电极)。在该pH值以下,在15 °C时E m以≈57 mV/pH单位增加,表明存在一个pK a为7.2 ± 0.3的可质子化基团。鉴于Tll0287的表达环境条件,以及系统发育分析、结构和序列同源性,讨论了Tll0287在微需氧条件下作为氧化还原传感器或HS氧化系统的细胞色素亚基的可能功能。

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