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气相和溶液中绿色荧光蛋白发色团模型中性、阴离子和中性+发色团的从头算高水准吸收光谱模拟。

High-level Ab Initio Absorption Spectra Simulations of Neutral, Anionic and Neutral+ Chromophore of Green Fluorescence Protein Chromophore Models in Gas Phase and Solution.

机构信息

Institute of General and Inorganic Chemistry, Bulgarian Academy of Sciences, Sofia, Bulgaria.

Institute for Theoretical Chemistry, University of Vienna, Vienna, Austria.

出版信息

Photochem Photobiol. 2017 Nov;93(6):1356-1367. doi: 10.1111/php.12778. Epub 2017 Jun 26.

Abstract

Semiclassical ab initio simulations of the absorption spectra of neutral and anionic p-hydroxybenzylidene-2,3-dimethylimidazolinone (p-HBDI), a model chromophore of green fluorescent protein (GFP) and of a positively charged neutral (N+)-HBDI chromophore model, were performed in gas phase with the resolution-of-identity algebraic diagrammatic construction through second-order (RI-ADC(2)) method. The calculated absorption spectra in gas phase are composed of one band centered at 3.51 eV (HBDI), 2.50 eV (HBDI ) and 3.02 eV ((N+)-HBDI) owing to the absorption of the first ππ* transition. Band maxima are redshifted by ~0.1 eV with respect to the corresponding vertical energies. The COSMO-RI-ADC(2) calculations of the first vertical excitation energy of HBDI, HBDI and (N+)-HBDI forms in polar solution including microsolvation simulate the observed solvent redshift for neutral HBDI and the solvent blueshift of the HBDI and (N+)-HBDI forms. The state-specific solvation approach applied to TDDFT calculations reproduced the experimental solvent shifts for the three HBDI forms, demonstrating a more accurate theoretical description as compared to the linear-response TDDFT approach.

摘要

采用含单位分解的二阶微扰理论(RI-ADC(2))方法,在气相中对中性和阴离子对羟基苯亚甲基-2,3-二甲基咪唑啉酮(p-HBDI)、绿色荧光蛋白(GFP)模型发色团和带正电荷的中性(N+)-HBDI 发色团模型的吸收光谱进行了半经典从头算模拟。气相中计算得到的吸收光谱由一个中心位于 3.51 eV(HBDI)、2.50 eV(HBDI )和 3.02 eV((N+)-HBDI)的带组成,这归因于第一 ππ*跃迁的吸收。与相应的垂直能相比,带极大值红移了约 0.1 eV。包括微溶剂化在内的极性溶液中 HBDI、HBDI 和(N+)-HBDI 形式的第一垂直激发能的 COSMO-RI-ADC(2)计算模拟了中性 HBDI 的观察到的溶剂红移以及 HBDI 和(N+)-HBDI 形式的溶剂蓝移。应用于 TDDFT 计算的态特异溶剂化方法再现了三种 HBDI 形式的实验溶剂位移,与线性响应 TDDFT 方法相比,这提供了更准确的理论描述。

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