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欧洲窄头和宽头玻璃鳗鲡(Anguilla anguilla)的基因差异表达表明头部形状二态性与生长速率和趋化性之间存在转录组学联系。

Differential gene expression in narrow- and broad-headed European glass eels (Anguilla anguilla) points to a transcriptomic link of head shape dimorphism with growth rate and chemotaxis.

作者信息

De Meyer J, Maes G E, Dirks R P, Adriaens D

机构信息

Evolutionary Morphology of Vertebrates, University Ghent, Ghent, Belgium.

Centre for Sustainable Tropical Fisheries and Aquaculture, Comparative Genomics Centre, College of Sciences and Engineering, James Cook University, Townsville, Qld, Australia.

出版信息

Mol Ecol. 2017 Aug;26(15):3943-3953. doi: 10.1111/mec.14155. Epub 2017 May 18.

Abstract

One of the major challenges in evolutionary biology is to understand the mechanisms underlying morphological dimorphism and plasticity, including the genomic basis of traits and links to ecology. At the yellow eel stage of the European eel (Anguilla anguilla), two morphotypes are found: broad- and narrow-heads. This dimorphism has been linked to dietary differences, with broad-heads feeding on harder, larger prey than narrow-heads. However, recent research showed that both morphotypes could be distinguished at the glass eel stage, the nonfeeding predecessor of the yellow eel stage, implying that nondietary factors play a role in the development of this head shape dimorphism. Here, we used transcriptome profiling (RNAseq) to identify differentially expressed genes between broad- and narrow-headed glass eels. We found 260 significantly differentially expressed genes between the morphotypes, of which most were related to defence and immune responses. Interestingly, two genes involved in growth (soma and igf2) were significantly upregulated in narrow-heads, while nine genes involved in chemotaxis showed significant differential expression. Thus, we found support for the observation that head shape is associated with somatic growth, with fast-growing eels developing a narrower head. Additionally, observations in the wild have shown that slow-growers prefer freshwater, while fast-growers prefer brackish water. The differential expression of genes involved in chemotaxis seems to indicate that glass eel growth rate and habitat choice are linked. We hypothesize that two levels of segregation could take place in the European eel: first according to habitat choice and second according to feeding preference.

摘要

进化生物学的主要挑战之一是理解形态二态性和可塑性背后的机制,包括性状的基因组基础以及与生态学的联系。在欧洲鳗鲡(Anguilla anguilla)的黄鳗阶段,发现了两种形态类型:宽头型和窄头型。这种二态性与饮食差异有关,宽头型鳗鲡比窄头型鳗鲡捕食更硬、更大的猎物。然而,最近的研究表明,在玻璃鳗阶段(黄鳗阶段的非摄食前期)就可以区分这两种形态类型,这意味着非饮食因素在这种头部形状二态性的发育中起作用。在这里,我们使用转录组分析(RNA测序)来鉴定宽头型和窄头型玻璃鳗之间差异表达的基因。我们发现两种形态类型之间有260个显著差异表达的基因,其中大多数与防御和免疫反应有关。有趣的是,两个与生长相关的基因(soma和igf2)在窄头型中显著上调,而九个与趋化性有关的基因显示出显著的差异表达。因此,我们支持这样的观察结果,即头部形状与体细胞生长相关,生长快的鳗鲡头部较窄。此外,在野外的观察表明,生长缓慢的鳗鲡更喜欢淡水,而生长快速的鳗鲡更喜欢半咸水。参与趋化性的基因的差异表达似乎表明玻璃鳗的生长速度和栖息地选择是相关的。我们假设欧洲鳗鲡可能会发生两个层次的分化:首先是根据栖息地选择,其次是根据摄食偏好。

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