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生物系统中的孤对-π相互作用:存在、功能及物理起源

Lone pair-π interactions in biological systems: occurrence, function, and physical origin.

作者信息

Kozelka Jiří

机构信息

Department of Condensed Matter Physics, Faculty of Science, Masaryk University, Kotlářská 2, 61137, Brno, Czech Republic.

INSERM, U 1134, DSIMB, 75739, Paris, France.

出版信息

Eur Biophys J. 2017 Dec;46(8):729-737. doi: 10.1007/s00249-017-1210-1. Epub 2017 May 2.

DOI:10.1007/s00249-017-1210-1
PMID:28466098
Abstract

Lone pair-π interactions are now recognized as a supramolecular bond whose existence in biological systems is documented by a growing number of examples. They are commonly attributed to electrostatic forces. This review attempts to highlight some recent discoveries evidencing the important role which lone pair-π interactions, and anion-π interactions in particular, play in stabilizing the structure and affecting the function of biomolecules. Special attention is paid to studies exploring the physical origin of these at first glance counterintuitive interactions between a lone pair of electrons of one residue and the π-cloud of another. Recent theoretical work went beyond the popular electrostatic model and inquired the extent to which orbital interactions have to be taken into account. In at least one biologically relevant case-that of anion-flavin interactions-a substantial charge-transfer component has been shown to operate.

摘要

孤对电子-π相互作用如今被视为一种超分子键,越来越多的实例证明了其在生物系统中的存在。它们通常被归因于静电力。本综述旨在突出一些最新发现,这些发现表明孤对电子-π相互作用,尤其是阴离子-π相互作用,在稳定生物分子结构和影响其功能方面发挥着重要作用。特别关注了那些探究一个残基的孤对电子与另一个残基的π电子云之间乍一看违反直觉的相互作用的物理起源的研究。近期的理论工作超越了流行的静电模型,探讨了必须考虑轨道相互作用的程度。至少在一个与生物学相关的例子——阴离子-黄素相互作用中——已证明存在大量电荷转移成分。

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本文引用的文献

1
Anion-π Interactions in Flavoproteins Involve a Substantial Charge-Transfer Component.阴离子-π 相互作用涉及 flavoproteins 中的大量电荷转移成分。
Chemistry. 2017 Mar 8;23(14):3246-3250. doi: 10.1002/chem.201605307. Epub 2017 Feb 8.
2
Lone-pair-π interactions: analysis of the physical origin and biological implications.孤对-π相互作用:物理起源及生物学意义分析
Phys Chem Chem Phys. 2016 Jul 28;18(28):19472-81. doi: 10.1039/c6cp01524g. Epub 2016 Jul 5.
3
Experimental investigation of anion-π interactions--applications and biochemical relevance.
五氟硫基芳基碘化物诱导的卤键研究:合理药物设计中潜在的卤键供体基团。
Molecules. 2019 Oct 7;24(19):3610. doi: 10.3390/molecules24193610.
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Regional Biophysics Conference - RBC2016.区域生物物理学会议 - RBC2016
Eur Biophys J. 2017 Dec;46(8):689-690. doi: 10.1007/s00249-017-1265-z.
阴离子-π相互作用的实验研究——应用及生化相关性
Chem Commun (Camb). 2016 Jan 31;52(9):1778-95. doi: 10.1039/c5cc09072e.
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Multi-center covalency: revisiting the nature of anion-π interactions.多中心共价性:重新审视阴离子-π相互作用的本质
Phys Chem Chem Phys. 2015 Nov 11;17(45):30670-9. doi: 10.1039/c5cp05777a.
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Structural Analysis of Streptococcus pyogenes NADH Oxidase: Conformational Dynamics Involved in Formation of the C(4a)-Peroxyflavin Intermediate.化脓性链球菌NADH氧化酶的结构分析:参与C(4a)-过氧黄素中间体形成的构象动力学
Biochemistry. 2015 Nov 17;54(45):6815-29. doi: 10.1021/acs.biochem.5b00676. Epub 2015 Nov 6.
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On the non-classical contribution in lone-pair-π interaction: IQA perspective.孤对-π相互作用中非经典贡献的IQA视角
Phys Chem Chem Phys. 2015 Oct 21;17(39):26183-90. doi: 10.1039/c5cp04489h. Epub 2015 Sep 18.
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