Hayashida Tsunefusa, Tsuchiya Kiyoto, Kikuchi Yoshimi, Oka Shinichi, Gatanaga Hiroyuki
AIDS Clinical Center, National Center for Global Health and Medicine, Tokyo, Japan.
Center for AIDS Research, Kumamoto University, Kumamoto, Japan.
PLoS One. 2017 May 4;12(5):e0177033. doi: 10.1371/journal.pone.0177033. eCollection 2017.
The association between emergence of CXCR4-tropic HIV-1 variants (X4 variants) and disease progression of HIV-1 infection has been reported. However, it is not known whether the emergence of X4 variants is the cause or result of HIV-1 disease progression. We tried to answer this question.
HIV-1 env sequences around the V3 region were analyzed in serially stocked samples in order to determine whether X4 variants emerged before or after the fall in CD4+ T-cell count.
The study subjects were five HIV-1-infected hemophiliac slow progressors. Deep sequencing around the HIV-1 env V3 region was conducted in duplicate. Tropism was predicted by geno2pheno [coreceptor] 2.5 with cutoff value of false positive ratio at <5%. When X4 variant was identified in the latest stocked sample before the introduction of antiretroviral therapy, we checked viral genotype in previously stocked samples to determine the time of emergence of X4 variants.
Emergence of X4 variants was noted in two of the five patients when their CD4+ T-cell counts were still high. The rate of decrease of CD4+ T-cell count or of rise of HIV-1 load accelerated significantly after the emergence of X4 variants in these two cases. Phylogenetic analysis showed that these X4 variants emerged from CCR5-tropic HIV-1 viruses with several amino acid changes in the V3 region.
The emergence of X4 variants preceded HIV-1 disease progression in two hemophiliac slow progressors.
已有报道称CXCR4嗜性HIV-1变异株(X4变异株)的出现与HIV-1感染的疾病进展之间存在关联。然而,尚不清楚X4变异株的出现是HIV-1疾病进展的原因还是结果。我们试图回答这个问题。
对连续储存的样本中的HIV-1 env V3区域周围序列进行分析,以确定X4变异株是在CD4+ T细胞计数下降之前还是之后出现。
研究对象为5名感染HIV-1的血友病缓慢进展者。对HIV-1 env V3区域周围进行深度测序,重复两次。使用geno2pheno [共受体] 2.5预测嗜性,假阳性率临界值<5%。当在开始抗逆转录病毒治疗前的最新储存样本中鉴定出X4变异株时,我们检查先前储存样本中的病毒基因型,以确定X4变异株的出现时间。
5名患者中有2名在其CD4+ T细胞计数仍较高时出现了X4变异株。在这两例中,X4变异株出现后,CD4+ T细胞计数下降速率或HIV-1载量上升速率显著加快。系统发育分析表明,这些X4变异株源自V3区域有几个氨基酸变化的CCR5嗜性HIV-1病毒。
在两名血友病缓慢进展者中,X4变异株的出现在HIV-1疾病进展之前。