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植物乙酰羟酸合酶的晶体结构,几种商业除草剂的作用靶点。

Crystal structure of plant acetohydroxyacid synthase, the target for several commercial herbicides.

作者信息

Garcia Mario Daniel, Wang Jian-Guo, Lonhienne Thierry, Guddat Luke William

机构信息

School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Australia.

State-Key Laboratory and Institute of Elemento-Organic Chemistry, National Pesticide Engineering Research Center and College of Chemistry, Nankai University, Tianjin, China.

出版信息

FEBS J. 2017 Jul;284(13):2037-2051. doi: 10.1111/febs.14102. Epub 2017 May 29.

Abstract

UNLABELLED

Acetohydroxyacid synthase (AHAS, EC 2.2.1.6) is the first enzyme in the branched-chain amino acid biosynthesis pathway. Five of the most widely used commercial herbicides (i.e. sulfonylureas, imidazolinones, triazolopyrimidines, pyrimidinyl-benzoates and sulfonylamino-cabonyl-triazolinones) target this enzyme. Here we have determined the first crystal structure of a plant AHAS in the absence of any inhibitor (2.9 Å resolution) and it shows that the herbicide-binding site adopts a folded state even in the absence of an inhibitor. This is unexpected because the equivalent regions for herbicide binding in uninhibited Saccharomyces cerevisiae AHAS crystal structures are either disordered, or adopt a different fold when the herbicide is not present. In addition, the structure provides an explanation as to why some herbicides are more potent inhibitors of Arabidopsis thaliana AHAS compared to AHASs from other species (e.g. S. cerevisiae). The elucidation of the native structure of plant AHAS provides a new platform for future rational structure-based herbicide design efforts.

DATABASE

The coordinates and structure factors for uninhibited AtAHAS have been deposited in the Protein Data Bank (www.pdb.org) with the PDB ID code 5K6Q.

摘要

未标记

乙酰羟酸合酶(AHAS,EC 2.2.1.6)是支链氨基酸生物合成途径中的第一个酶。五种最广泛使用的商业除草剂(即磺酰脲类、咪唑啉酮类、三唑并嘧啶类、嘧啶基苯甲酸酯类和磺酰氨基羰基三唑啉酮类)作用于该酶。在此,我们确定了在没有任何抑制剂情况下植物AHAS的首个晶体结构(分辨率为2.9 Å),结果表明即使在没有抑制剂的情况下,除草剂结合位点也呈折叠状态。这是出乎意料的,因为在未受抑制的酿酒酵母AHAS晶体结构中,除草剂结合的等效区域要么无序,要么在没有除草剂时呈现不同的折叠状态。此外,该结构解释了为什么与来自其他物种(如酿酒酵母)的AHAS相比,一些除草剂是拟南芥AHAS更有效的抑制剂。植物AHAS天然结构的阐明为未来基于结构的合理除草剂设计工作提供了一个新平台。

数据库

未受抑制的AtAHAS的坐标和结构因子已存入蛋白质数据库(www.pdb.org),PDB ID代码为5K6Q。

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