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甘薯无症状病毒1的基因组特征:一种具有异常九核苷酸序列的玉米褪绿斑驳病毒属病毒

Genome characterization of sweet potato symptomless virus 1: a mastrevirus with an unusual nonanucleotide sequence.

作者信息

Cao Mengji, Lan Pingxiu, Li Fan, Abad Jorge, Zhou Changyong, Li Ruhui

机构信息

National Citrus Engineering Research Center, Citrus Research Institute, Southwest University, Chongqing, 400712, China.

USDA-ARS, National Germplasm Resources Laboratory, Beltsville, MD, 20705, USA.

出版信息

Arch Virol. 2017 Sep;162(9):2881-2884. doi: 10.1007/s00705-017-3396-z. Epub 2017 May 11.

DOI:10.1007/s00705-017-3396-z
PMID:28497216
Abstract

Complete genomic sequences of nine isolates of sweet potato symptomless virus 1 (SPSMV-1), a virus of the genus Mastrevirus in the family Geminiviridae, were determined from sweet potato accessions from different countries and found to be 2,559-2,602 nucleotides in length. These isolates shared 97-100% genome sequence identity and had an unusual nonanucleotide sequence (TAAGATTCC) in a large intergenic region as well as an additional open reading frame, C3, which is conserved in dicot-infecting mastreviruses.

摘要

从不同国家的甘薯种质中测定了9株甘薯无症状病毒1(SPSMV-1)的完整基因组序列,该病毒属于双生病毒科玉米线条病毒属,发现其长度为2559-2602个核苷酸。这些分离株的基因组序列同一性为97%-100%,在一个大的基因间隔区有一个不寻常的九核苷酸序列(TAAGATTCC),以及一个额外的开放阅读框C3,该开放阅读框在感染双子叶植物的玉米线条病毒中是保守的。

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