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将波美拉尼亚健康研究中的元数据自动转换为ODM格式。

Automatic Conversion of Metadata from the Study of Health in Pomerania to ODM.

作者信息

Hegselmann Stefan, Gessner Sophia, Neuhaus Philipp, Henke Jörg, Schmidt Carsten Oliver, Dugas Martin

机构信息

Institute of Medical Informatics, University of Münster, Germany.

Institute for Community Medicine, University of Greifswald, Germany.

出版信息

Stud Health Technol Inform. 2017;236:88-96.

Abstract

BACKGROUND

Electronic collection and high quality analysis of medical data is expected to have a big potential to improve patient care and medical research. However, the integration of data from different stake holders is posing a crucial problem. The exchange and reuse of medical data models as well as annotations with unique semantic identifiers were proposed as a solution.

OBJECTIVES

Convert metadata from the Study of Health in Pomerania to the standardized CDISC ODM format.

METHODS

The structure of the two data formats is analyzed and a mapping is suggested and implemented.

RESULTS

The metadata from the Study of Health in Pomerania was successfully converted to ODM. All relevant information was included in the resulting forms. Three sample forms were evaluated in-depth, which demonstrates the feasibility of this conversion.

CONCLUSION

Hundreds of data entry forms with more than 15.000 items can be converted into a standardized format with some limitations, e.g. regarding logical constraints. This enables the integration of the Study of Health in Pomerania metadata into various systems, facilitating the implementation and reuse in different study sites.

摘要

背景

医学数据的电子收集和高质量分析有望在改善患者护理和医学研究方面具有巨大潜力。然而,整合来自不同利益相关者的数据正构成一个关键问题。有人提议将医学数据模型以及带有唯一语义标识符的注释进行交换和重用作为解决方案。

目的

将波美拉尼亚健康研究的元数据转换为标准化的CDISC ODM格式。

方法

分析了两种数据格式的结构,并提出并实施了映射。

结果

波美拉尼亚健康研究的元数据成功转换为ODM。所有相关信息都包含在生成的表单中。对三个样本表单进行了深入评估,这证明了这种转换的可行性。

结论

数百个包含超过15000个条目的数据输入表单可以转换为标准化格式,但存在一些限制,例如在逻辑约束方面。这使得波美拉尼亚健康研究的元数据能够集成到各种系统中,便于在不同研究地点实施和重用。

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