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种内遗传变异和 Wiseana 复合体(鳞翅目:草蛉科)的单倍型,以及开发非基于测序的鉴定工具以辅助实地研究。

Genetic variation within species and haplotypes of the Wiseana (Lepidoptera: Hepialidae) complex and development of non-sequenced based identification tools to aid field studies.

机构信息

AgResearch, Lincoln Science Centre, Lincoln, Canterbury, New Zealand.

AgResearch, Invermay Agricultural Centre, Mosgiel, Dunedin, New Zealand.

出版信息

Pest Manag Sci. 2017 Nov;73(11):2334-2344. doi: 10.1002/ps.4620. Epub 2017 Aug 7.

DOI:10.1002/ps.4620
PMID:28544267
Abstract

BACKGROUND

Porina is the common name used to describe moths and caterpillars of the seven endemic species and three haplotypes of Wiseana in New Zealand. Several species have adapted to eating introduced pasture plants; however, a paucity of defining morphological characteristics has meant that porina are grouped as indistinguishable species within a complex. This study aimed to develop non-sequencing identification methods for porina species.

RESULTS

We sequenced 1718 bp of the mitochondrial cytochrome oxidase genes for all Wiseana species and haplotypes using 75 specimens collected from 42 sites throughout New Zealand. Two identification methods were developed; the high-resolution melt method uses 106 bp of the cytochrome oxidase I gene, and the restriction fragment polymorphism method uses a larger 700 bp region from the same gene. Validation was performed on a further 275 specimens. Melt curve profiles varied more with population heterogeneity than digest results. In both methods, W. mimica and W. jocosa were inseparable. W. fuliginea grouped with W. mimica and W. jocosa in the restriction method, but the melt curve profile differed.

CONCLUSION

Until now, ecological studies of porina at the species level have been implausible. Our non-sequencing based methods allow rapid identification of moths and caterpillars to species and haplotype level, paving the way for ecological studies of pasture pest species and the development of species-specific mitigation strategies. © 2017 Society of Chemical Industry.

摘要

背景

Porina 是新西兰七种特有种和三种 Wiseana 单倍型的蛾和毛毛虫的通用名称。有几个物种已经适应了食用引进的牧场植物;然而,缺乏明确的形态特征意味着 Porina 被归为复杂物种中的无法区分的物种。本研究旨在开发 Porina 物种的非测序鉴定方法。

结果

我们使用从新西兰 42 个地点收集的 75 个标本,对所有 Wiseana 物种和单倍型进行了 1718bp 的线粒体细胞色素氧化酶基因测序。开发了两种鉴定方法;高分辨率熔解曲线法使用细胞色素氧化酶 I 基因的 106bp,限制片段多态性法使用相同基因的 700bp 较大区域。进一步对 275 个标本进行了验证。熔解曲线图谱的变化比消化结果更多地受到种群异质性的影响。在这两种方法中,W. mimica 和 W. jocosa 无法区分。在限制方法中,W. fuliginea 与 W. mimica 和 W. jocosa 聚在一起,但熔解曲线图谱不同。

结论

到目前为止,对 Porina 物种水平的生态研究一直是不可信的。我们基于非测序的方法允许快速鉴定蛾和毛毛虫的物种和单倍型水平,为牧场害虫物种的生态研究和特定物种缓解策略的发展铺平了道路。© 2017 化学工业协会。

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