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基于四个线粒体基因序列推断云南光唇鱼(硬骨鱼纲,鲤科)的遗传多样性和种群结构

Genetic diversity and population structure of Acrossocheilus yunnanensis (Teleostei, Cyprinidae) inferred from four mitochondrial gene sequences.

作者信息

Zheng Lan-Ping, Yang Jun-Xing

机构信息

a State Key Laboratory of Genetic Resources and Evolution , Kunming Institute of Zoology, Chinese Academy of Sciences , Kunming , China.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2018 May;29(4):606-614. doi: 10.1080/24701394.2017.1331346. Epub 2017 May 26.

Abstract

In this paper, we examine the genetic diversity, population structure and demographic history of Acrossocheilus yunnanensis inferred from four mitochondrial gene sequences. Twenty-two haplotypes were identified for A. yunnanensis. The total haplotype and nucleotide diversities of A. yunnanensis are 0.9206 and 0.024654, respectively. The monophyly of the haplotypes is supported by all phylogenetic analyses. All the haplotypes can be divided into four major lineages. The results of AMOVA and SAMOVA suggest that the best grouping pattern is to divide four groups, and that most of the variation of genetic divergence is present among these groups. The population expansion of A. yunnanensis is not supported by the analyses of population demography. Our results revealing the genetic background of A. yunnanensis will prove helpful in protecting its genetic diversity and utilizing this resource in a reasonable manner.

摘要

在本文中,我们通过四个线粒体基因序列研究了云南光唇鱼的遗传多样性、种群结构和种群历史。云南光唇鱼共鉴定出22个单倍型。云南光唇鱼的总单倍型多样性和核苷酸多样性分别为0.9206和0.024654。所有系统发育分析均支持单倍型的单系性。所有单倍型可分为四个主要谱系。方差分析(AMOVA)和同时空多变量分析(SAMOVA)结果表明,最佳分组模式是分为四组,且大部分遗传分化变异存在于这些组间。种群动态分析不支持云南光唇鱼的种群扩张。我们揭示云南光唇鱼遗传背景的结果将有助于保护其遗传多样性并合理利用这一资源。

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