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一种用于溶血曼氏杆菌1型、2型和6型分子荚膜血清分型的多重聚合酶链反应检测方法。

A multiplex PCR assay for molecular capsular serotyping of Mannheimia haemolytica serotypes 1, 2, and 6.

作者信息

Klima Cassidy L, Zaheer Rahat, Briggs Robert E, McAllister Tim A

机构信息

Agriculture and Agri-Food Canada Research Centre, Lethbridge, Canada.

USDA, ARS, National Animal Disease Center, Ames, IA, USA.

出版信息

J Microbiol Methods. 2017 Aug;139:155-160. doi: 10.1016/j.mimet.2017.05.010. Epub 2017 May 24.

Abstract

Mannheimia haemolytica is an important respiratory pathogen of ruminants. Of the 12 capsular serovars identified, 1 and 6 are most frequently associated with disease in cattle, while 2 is largely a commensal. Comparative analysis of 24 M. haemolytica genomes was used to identify unique genes associated with capsular polysaccharide synthesis as amplification targets in a multiplex PCR assay to discriminate between serotype 1, 2, and 6 strains. The specificity of serotype specific gene targets was evaluated against 47 reference strains representing 12 known serovars of M. haemolytica and 101 field isolates identified through antisera agglutination as serotypes 1, 2, or 6. The results suggest this simple and cost-effective serotype specific PCR assay can be used as an alternative to agglutination based techniques to serotype the majority of M. haemolytica collected from bovines, thus averting the need to use animals and invest in expensive sera development for agglutination assays. In addition, the gene targets identified in this study can be used in silico to identify serotype 1, 2, and 6 strains in sequenced M. haemolytica isolates without the need for culture based analysis.

摘要

溶血曼氏杆菌是反刍动物重要的呼吸道病原体。在已鉴定出的12种荚膜血清型中,1型和6型最常与牛的疾病相关,而2型主要是共生菌。对24个溶血曼氏杆菌基因组进行比较分析,以鉴定与荚膜多糖合成相关的独特基因,作为多重PCR检测中的扩增靶点,用于区分1型、2型和6型菌株。针对47株代表溶血曼氏杆菌12种已知血清型的参考菌株以及101株通过抗血清凝集鉴定为1型、2型或6型的田间分离株,评估血清型特异性基因靶点的特异性。结果表明,这种简单且经济高效的血清型特异性PCR检测方法可作为基于凝集技术的替代方法,用于对从牛身上采集的大多数溶血曼氏杆菌进行血清分型,从而避免使用动物以及为凝集试验投入资金开发昂贵的抗血清。此外,本研究中鉴定出的基因靶点可用于在计算机上识别已测序的溶血曼氏杆菌分离株中的1型、2型和6型菌株,而无需基于培养的分析。

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