用于……中次生代谢物分析的小RNA测序
Small RNA sequencing for secondary metabolite analysis in .
作者信息
Samad Abdul Fatah A, Nazaruddin Nazaruddin, Sajad Muhammad, Jani Jaeyres, Murad Abdul Munir Abdul, Zainal Zamri, Ismail Ismanizan
机构信息
School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, 43600 UKM Bangi, Selangor, Malaysia.
Department of Chemistry, Faculty of Mathematics and Natural Sciences, University of Syiah Kuala, Darussalam, Banda Aceh 23111, Indonesia.
出版信息
Genom Data. 2017 May 13;13:3-4. doi: 10.1016/j.gdata.2017.05.014. eCollection 2017 Sep.
(kesum) is an important medicinal plant and commonly found in southeast countries; Malaysia, Thailand, Indonesia, and Vietnam. This plant is enriched with a variety of secondary metabolites (SMs), and among these SMs, terpenoids are in high abundance. Terpenoids are comprised of many valuable biomolecules which have well-established role in agriculture and pharmaceutical industry. In , for the first time, we have generated small RNAs data sets, which can be used as tool in deciphering their roles in terpenoid biosynthesis pathways. Fungal pathogen, was used as elicitor to trigger SMs biosynthesis in Raw reads and small RNA analysis data have already been deposited at GenBank under the accessions; SRX2645684 (-treated), SRX2645685 (-treated), SRX2645686 (mock-infected), and SRX2645687 (mock-infected).
（kesum）是一种重要的药用植物，常见于东南亚国家，如马来西亚、泰国、印度尼西亚和越南。这种植物富含多种次生代谢产物（SMs），其中萜类化合物含量很高。萜类化合物由许多有价值的生物分子组成，它们在农业和制药工业中具有公认的作用。在本研究中，我们首次生成了小RNA数据集，可作为工具来解读它们在萜类生物合成途径中的作用。真菌病原体被用作激发子，以触发kesum中SMs的生物合成。原始读数和小RNA分析数据已存入GenBank，登录号分别为：SRX2645684（处理）、SRX2645685（处理）、SRX2645686（模拟感染）和SRX2645687（模拟感染）。
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