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黑腹果蝇Y连锁rDNA变异的两种中性检验

TWO NEUTRALITY TESTS OF Y-LINKED RDNA VARIATION IN DROSOPHILA MELANOGASTER.

作者信息

Clark Andrew G, Lyckegaard Eva M S

机构信息

Department of Biology and Genetics Program, 208 Mueller Laboratory, Pennsylvania State University, University Park, PA, 16802, USA.

出版信息

Evolution. 1990 Dec;44(8):2106-2112. doi: 10.1111/j.1558-5646.1990.tb04315.x.

Abstract

The evolutionary significance of Y-chromosomal ribosomal DNA sequence variation was tested by two different means. A single sample of males and females was collected from a peach orchard in central Pennsylvania. Wild-caught males and sons of wild-caught, wild-inseminated females were crossed to virgin females having an X-linked rDNA deficiency. Genomic DNA from male progeny of these crosses was extracted and digested with the single restriction endonuclease, DraI. Southern blots of these digestions, when probed with the complete rDNA probe, revealed 10 distinct patterns of restriction fragments. A chisquare test for the homogeneity of the frequency distributions of the sample of wild males and sons of wild females failed to reject a neutral null hypothesis. The allele frequency configuration was tested with the Ewens-Watterson test, and the departure from the infinite alleles neutral model was not significant. Simulations were performed to test the sensitivity of the tests to misclassification and to quantify the power of the two tests.

摘要

通过两种不同方法对Y染色体核糖体DNA序列变异的进化意义进行了测试。从宾夕法尼亚州中部的一个桃园采集了一份雄性和雌性样本。将野生捕获的雄性以及野生捕获、野生受精雌性的后代与具有X连锁rDNA缺陷的处女雌性进行杂交。从这些杂交后代的雄性子代中提取基因组DNA,并用单一限制性内切酶DraI进行消化。用完整的rDNA探针探测这些消化产物的Southern印迹,揭示了10种不同的限制性片段模式。对野生雄性样本和野生雌性后代的频率分布进行齐性卡方检验,未能拒绝中性零假设。用Ewens-Watterson检验对等位基因频率配置进行了测试,与无限等位基因中性模型的偏差不显著。进行了模拟以测试这些检验对错误分类的敏感性,并量化这两种检验的功效。

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