Ohta Tomoko
National Institute of Genetics, Mishima 411, Japan.
Evolution. 1988 Mar;42(2):375-386. doi: 10.1111/j.1558-5646.1988.tb04140.x.
In order to understand the origin of multigene families, Monte Carlo simulations were performed to see how a genetic system evolves under unequal crossing-over, mutation, random genetic drift and natural selection, starting from a single gene copy. Both haploid and diploid models were examined. Beneficial, neutral, and detrimental mutations were incorporated, and "positive" selection favors those chromosomes (haploid) or individuals (diploid) with more beneficial mutations than others. The same model for haploids was previously investigated with special reference to the evolution of gene organization, and the ratio of the numbers of beneficial genes to pseudogenes was found to be a rough indicator of the relative strengths of positive and negative (against deleterious alleles) natural selection (Ohta, 1987b). In the present paper, the evolution of gene organization and of sequence divergence among genes in the multigene family is examined. It is shown that positive selection accelerates the accumulation of arrays containing different beneficial mutations, but that total divergence including both neutral and beneficial mutations is not very sensitive to positive selection, under this model. The proportion of beneficial mutations in the total mutations accumulated is a better indicator of positive selection than is the total divergence. It is pointed out that various observed examples in which amino-acid substitutions are accelerated, as compared with synonymous substitutions in duplicated genes (Li, 1985), may reflect the effect of selection similar to the present scheme. The diploid model is shown to be more efficient for accumulating beneficial mutations in duplicated genes than the haploid one, and the relevance of this finding to the advantage of sexual reproduction is discussed.
为了理解多基因家族的起源,进行了蒙特卡罗模拟,以观察遗传系统从单个基因拷贝开始,在不等交换、突变、随机遗传漂变和自然选择作用下是如何进化的。研究了单倍体和二倍体模型。纳入了有益、中性和有害突变,“正”选择有利于那些具有比其他染色体(单倍体)或个体(二倍体)更多有益突变的染色体或个体。之前曾特别参照基因组织的进化对单倍体的相同模型进行过研究,发现有益基因与假基因数量之比是正选择和负选择(针对有害等位基因)相对强度的一个粗略指标(太田,1987b)。在本文中,研究了多基因家族中基因组织的进化以及基因间序列分歧的进化。结果表明,在该模型下,正选择加速了包含不同有益突变的阵列的积累,但包括中性和有益突变在内的总分歧对正选择不太敏感。积累的总突变中有益突变的比例比总分歧更能体现正选择。有人指出,与重复基因中的同义替换相比,氨基酸替换加速的各种观察实例(李,1985)可能反映了与本方案类似的选择效应。结果表明,二倍体模型在积累重复基因中的有益突变方面比单倍体模型更有效,并讨论了这一发现与有性生殖优势的相关性。