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通过变构平台重定向SR蛋白的核运输

Redirecting SR Protein Nuclear Trafficking through an Allosteric Platform.

作者信息

Aubol Brandon E, Hailey Kendra L, Fattet Laurent, Jennings Patricia A, Adams Joseph A

机构信息

Department of Pharmacology, University of California, San Diego, La Jolla, CA 92093-0636, USA.

Department of Chemistry & Biochemistry, University of California, San Diego, La Jolla, CA 92093-0636, USA.

出版信息

J Mol Biol. 2017 Jul 7;429(14):2178-2191. doi: 10.1016/j.jmb.2017.05.022. Epub 2017 May 31.

DOI:10.1016/j.jmb.2017.05.022
PMID:28576472
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5536852/
Abstract

Although phosphorylation directs serine-arginine (SR) proteins from nuclear storage speckles to the nucleoplasm for splicing function, dephosphorylation paradoxically induces similar movement, raising the question of how such chemical modifications are balanced in these essential splicing factors. In this new study, we investigated the interaction of protein phosphatase 1 (PP1) with the SR protein splicing factor (SRSF1) to understand the foundation of these opposing effects in the nucleus. We found that RNA recognition motif 1 (RRM1) in SRSF1 binds PP1 and represses its catalytic function through an allosteric mechanism. Disruption of RRM1-PP1 interactions reduces the phosphorylation status of the RS domain in vitro and in cells, redirecting SRSF1 in the nucleus. The data imply that an allosteric SR protein-phosphatase platform balances phosphorylation levels in a "goldilocks" region for the proper subnuclear storage of an SR protein splicing factor.

摘要

尽管磷酸化会引导丝氨酸-精氨酸(SR)蛋白从核内储存斑点转移至核质以发挥剪接功能,但去磷酸化却反常地引发类似的转移,这就提出了一个问题:在这些至关重要的剪接因子中,此类化学修饰是如何实现平衡的。在这项新研究中,我们探究了蛋白磷酸酶1(PP1)与SR蛋白剪接因子(SRSF1)之间的相互作用,以了解细胞核中这些相反效应的基础。我们发现,SRSF1中的RNA识别基序1(RRM1)与PP1结合,并通过变构机制抑制其催化功能。RRM1-PP1相互作用的破坏会降低体外和细胞中RS结构域的磷酸化状态,使SRSF1在细胞核中重新分布。这些数据表明,一个变构的SR蛋白-磷酸酶平台在一个“恰到好处”的区域平衡磷酸化水平,以实现SR蛋白剪接因子在细胞核内的适当储存。

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Acta Biochim Biophys Sin (Shanghai). 2024 Dec 10. doi: 10.3724/abbs.2024175.
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本文引用的文献

1
Release of SR Proteins from CLK1 by SRPK1: A Symbiotic Kinase System for Phosphorylation Control of Pre-mRNA Splicing.SRPK1促使CLK1释放SR蛋白:一种用于前体mRNA剪接磷酸化控制的共生激酶系统。
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Directional Phosphorylation and Nuclear Transport of the Splicing Factor SRSF1 Is Regulated by an RNA Recognition Motif.剪接因子SRSF1的定向磷酸化和核转运受RNA识别基序调控。
J Mol Biol. 2016 Jun 5;428(11):2430-2445. doi: 10.1016/j.jmb.2016.04.009. Epub 2016 Apr 15.
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Potential Antileukemia Effect and Structural Analyses of SRPK Inhibition by N-(2-(Piperidin-1-yl)-5-(Trifluoromethyl)Phenyl)Isonicotinamide (SRPIN340).N-(2-(哌啶-1-基)-5-(三氟甲基)苯基)异烟酰胺(SRPIN340)对SRPK的抑制作用及其潜在抗白血病效应与结构分析
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CLK2 Is an Oncogenic Kinase and Splicing Regulator in Breast Cancer.CLK2 是乳腺癌中的致癌激酶和剪接调控因子。
Cancer Res. 2015 Apr 1;75(7):1516-26. doi: 10.1158/0008-5472.CAN-14-2443. Epub 2015 Feb 10.
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Conserved proline-directed phosphorylation regulates SR protein conformation and splicing function.保守的脯氨酸定向磷酸化调节SR蛋白构象和剪接功能。
Biochem J. 2015 Mar 1;466(2):311-22. doi: 10.1042/BJ20141373.
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N-terminus of the protein kinase CLK1 induces SR protein hyperphosphorylation.蛋白激酶CLK1的N端诱导SR蛋白过度磷酸化。
Biochem J. 2014 Aug 15;462(1):143-52. doi: 10.1042/BJ20140494.
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Emerging functions of SRSF1, splicing factor and oncoprotein, in RNA metabolism and cancer.SRSF1(一种剪接因子和癌蛋白)在RNA代谢及癌症中的新功能。
Mol Cancer Res. 2014 Sep;12(9):1195-204. doi: 10.1158/1541-7786.MCR-14-0131. Epub 2014 May 7.
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Phosphorylation drives a dynamic switch in serine/arginine-rich proteins.磷酸化驱动丝氨酸/精氨酸丰富蛋白的动态转换。
Structure. 2013 Dec 3;21(12):2162-74. doi: 10.1016/j.str.2013.09.014. Epub 2013 Oct 31.
10
Topical antiangiogenic SRPK1 inhibitors reduce choroidal neovascularization in rodent models of exudative AMD.局部抗血管生成的 SRPK1 抑制剂可减少渗出性 AMD 啮齿动物模型中的脉络膜新生血管。
Invest Ophthalmol Vis Sci. 2013 Sep 5;54(9):6052-62. doi: 10.1167/iovs.13-12422.