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受无序状态控制:磷酸化调节剪接体组装中SRSF1结构域的可用性。

Controlled by disorder: Phosphorylation modulates SRSF1 domain availability for spliceosome assembly.

作者信息

Fargason Talia, Powell Erin, De Silva Naiduwadura Ivon Upekala, Paul Trenton, Zhang Zihan, Prevelige Peter, Zhang Jun

机构信息

Department of Chemistry, College of Arts and Sciences, University of Alabama at Birmingham, Birmingham, Alabama, USA.

Department of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA.

出版信息

Protein Sci. 2025 Mar;34(3):e70070. doi: 10.1002/pro.70070.

Abstract

Serine/arginine-rich splicing factor 1 (SRSF1) is key in the mRNA lifecycle including transcription, splicing, nonsense-mediated decay, and nuclear export. Consequently, its dysfunction is linked to cancers, viral evasion, and developmental disorders. The functionality of SRSF1 relies on its interactions with other proteins and RNA molecules. These processes are regulated by phosphorylation of its unstructured arginine/serine-rich tail (RS). Here, we characterize how phosphorylation affects SRSF1's protein and RNA interaction and phase separation. Using NMR paramagnetic relaxation enhancement and chemical shift perturbation, we find that when unphosphorylated, SRSF1's RS interacts with its first RNA-recognition motif (RRM1). Phosphorylation of RS decreases its interactions with the protein-binding site of RRM1 and increases its interactions with the RNA-binding site of RRM1. This change in SRSF1's intramolecular interactions increases the availability of protein-interacting sites on RRM1 and weakens RNA binding of SRSF1. Phosphorylation alters the phase separation of SRSF1 by diminishing the role of arginine in intermolecular interactions. These findings provide an unprecedented view of how SRSF1 influences the early-stage spliceosome assembly.

摘要

富含丝氨酸/精氨酸的剪接因子1(SRSF1)在mRNA生命周期中起着关键作用,包括转录、剪接、无义介导的衰变和核输出。因此,其功能障碍与癌症、病毒逃避和发育障碍有关。SRSF1的功能依赖于它与其他蛋白质和RNA分子的相互作用。这些过程受其无结构的富含精氨酸/丝氨酸的尾巴(RS)磷酸化的调节。在这里,我们描述了磷酸化如何影响SRSF1的蛋白质和RNA相互作用以及相分离。使用核磁共振顺磁弛豫增强和化学位移扰动,我们发现当未磷酸化时,SRSF1的RS与其第一个RNA识别基序(RRM1)相互作用。RS的磷酸化减少了其与RRM1蛋白质结合位点的相互作用,并增加了其与RRM1 RNA结合位点的相互作用。SRSF1分子内相互作用的这种变化增加了RRM1上蛋白质相互作用位点的可用性,并削弱了SRSF1的RNA结合。磷酸化通过减少精氨酸在分子间相互作用中的作用来改变SRSF1的相分离。这些发现为SRSF1如何影响早期剪接体组装提供了前所未有的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3255/11836896/6d7c41780601/PRO-34-e70070-g001.jpg

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