Simdyanov Timur G, Guillou Laure, Diakin Andrei Y, Mikhailov Kirill V, Schrével Joseph, Aleoshin Vladimir V
Faculty of Biology, Department of Invertebrate Zoology, Lomonosov Moscow State University, Moscow, Russian Federation.
UMR 7144, Laboratoire Adaptation et Diversité en Milieu Marin, CNRS, Paris, Roscoff, France.
PeerJ. 2017 May 30;5:e3354. doi: 10.7717/peerj.3354. eCollection 2017.
Gregarines are a group of early branching Apicomplexa parasitizing invertebrate animals. Despite their wide distribution and relevance to the understanding the phylogenesis of apicomplexans, gregarines remain understudied: light microscopy data are insufficient for classification, and electron microscopy and molecular data are fragmentary and overlap only partially.
Scanning and transmission electron microscopy, PCR, DNA cloning and sequencing (Sanger and NGS), molecular phylogenetic analyses using ribosomal RNA genes (18S (SSU), 5.8S, and 28S (LSU) ribosomal DNAs (rDNAs)).
We present the results of an ultrastructural and molecular phylogenetic study on the marine gregarine from the polychaete followed by evolutionary and taxonomic synthesis of the morphological and molecular phylogenetic evidence on eugregarines. The ultrastructure of generally corresponds to that of other eugregarines, but reveals some differences in epicytic folds (crests) and attachment apparatus to gregarines in the family Lecudinidae, where has been classified. Molecular phylogenetic trees based on SSU (18S) rDNA reveal several robust clades (superfamilies) of eugregarines, including Ancoroidea superfam. nov., which comprises two families (Ancoridae fam. nov. and Polyplicariidae) and branches separately from the Lecudinidae; thus, all representatives of Ancoroidea are here officially removed from the Lecudinidae. Analysis of sequence data also points to possible cryptic species within and the inclusion of numerous environmental sequences from anoxic habitats within the Ancoroidea. LSU (28S) rDNA phylogenies, unlike the analysis of SSU rDNA alone, recover a well-supported monophyly of the gregarines involved (eugregarines), although this conclusion is currently limited by sparse taxon sampling and the presence of fast-evolving sequences in some species. Comparative morphological analyses of gregarine teguments and attachment organelles lead us to revise their terminology. The terms "longitudinal folds" and "mucron" are restricted to archigregarines, whereas the terms "epicystic crests" and "epimerite" are proposed to describe the candidate synapomorphies of eugregarines, which, consequently, are considered as a monophyletic group. Abolishing the suborders Aseptata and Septata, incorporating neogregarines into the Eugregarinida, and treating the major molecular phylogenetic lineages of eugregarines as superfamilies appear as the best way of reconciling recent morphological and molecular evidence. Accordingly, the diagnosis of the order Eugregarinida Léger, 1900 is updated.
簇虫是一类早期分支的顶复门寄生虫,寄生于无脊椎动物。尽管它们分布广泛且对于理解顶复门的系统发育具有重要意义,但簇虫仍未得到充分研究:光学显微镜数据不足以用于分类,而电子显微镜和分子数据零碎且仅部分重叠。
扫描电子显微镜和透射电子显微镜、聚合酶链式反应(PCR)、DNA克隆与测序(桑格测序法和新一代测序技术)、使用核糖体RNA基因(18S(小亚基)、5.8S和28S(大亚基)核糖体DNA(rDNA))进行分子系统发育分析。
我们展示了对来自多毛纲动物的海洋簇虫进行超微结构和分子系统发育研究的结果,随后对真簇虫的形态学和分子系统发育证据进行了进化和分类学综合分析。该簇虫的超微结构总体上与其他真簇虫一致,但在包囊褶皱(嵴)以及与已被分类到莱库迪科的簇虫的附着器方面显示出一些差异。基于小亚基(18S)rDNA构建的分子系统发育树揭示了真簇虫的几个稳健分支(总科),包括新的锚簇虫总科,它包含两个科(新的锚簇虫科和多褶簇虫科),并与莱库迪科分开分支;因此,锚簇虫总科的所有代表物种在此正式从莱库迪科中移除。序列数据分析还指出该簇虫可能存在隐存种,并且在锚簇虫总科中包含来自缺氧生境的大量环境序列。与单独分析小亚基rDNA不同,大亚基(28S)rDNA系统发育分析得出了所涉及的簇虫(真簇虫)的一个得到充分支持的单系群,尽管目前这一结论受到分类单元抽样稀少以及某些物种中存在快速进化序列的限制。对簇虫皮层和附着细胞器的比较形态学分析使我们修订了它们的术语。“纵向褶皱”和“短尾”这两个术语仅限于原簇虫,而“包囊嵴”和“后吸盘”这两个术语被提议用于描述真簇虫的候选共衍征,因此,真簇虫被视为一个单系群。废除无隔板亚目和有隔板亚目,将新簇虫归入真簇虫目,并将真簇虫的主要分子系统发育谱系视为总科,似乎是调和近期形态学和分子证据的最佳方式。因此,对1900年设立的真簇虫目(Léger)的诊断进行了更新。