• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

新型耐酸热稳定葡萄糖1-脱氢酶的生化与计算分析

Biochemical and Computational Insights on a Novel Acid-Resistant and Thermal-Stable Glucose 1-Dehydrogenase.

作者信息

Ding Haitao, Gao Fen, Yu Yong, Chen Bo

机构信息

Key Laboratory for Polar Science of State Oceanic Administration, Polar Research Institute of China, Shanghai 200136, China.

East China Sea Fisheries Research Institute, Shanghai 200090, China.

出版信息

Int J Mol Sci. 2017 Jun 5;18(6):1198. doi: 10.3390/ijms18061198.

DOI:10.3390/ijms18061198
PMID:28587256
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5486021/
Abstract

Due to the dual cofactor specificity, glucose 1-dehydrogenase (GDH) has been considered as a promising alternative for coenzyme regeneration in biocatalysis. To mine for potential GDHs for practical applications, several genes encoding for GDH had been heterogeneously expressed in BL21 (DE3) for primary screening. Of all the candidates, GDH from sp. ZJ (BzGDH) was one of the most robust enzymes. BzGDH was then purified to homogeneity by immobilized metal affinity chromatography and characterized biochemically. It displayed maximum activity at 45 °C and pH 9.0, and was stable at temperatures below 50 °C. BzGDH also exhibited a broad pH stability, especially in the acidic region, which could maintain around 80% of its initial activity at the pH range of 4.0-8.5 after incubating for 1 hour. Molecular dynamics simulation was conducted for better understanding the stability feature of BzGDH against the structural context. The in-silico simulation shows that BzGDH is stable and can maintain its overall structure against heat during the simulation at 323 K, which is consistent with the biochemical studies. In brief, the robust stability of BzGDH made it an attractive participant for cofactor regeneration on practical applications, especially for the catalysis implemented in acidic pH and high temperature.

摘要

由于具有双辅因子特异性,葡萄糖1-脱氢酶(GDH)被认为是生物催化中辅酶再生的一种有前景的替代物。为了挖掘用于实际应用的潜在GDH,几个编码GDH的基因已在BL21(DE3)中进行异源表达以进行初步筛选。在所有候选物中,来自sp. ZJ的GDH(BzGDH)是最具活力的酶之一。然后通过固定化金属亲和色谱将BzGDH纯化至同质,并进行生化表征。它在45°C和pH 9.0时表现出最大活性,并且在低于50°C的温度下稳定。BzGDH还表现出较宽的pH稳定性,特别是在酸性区域,在4.0-8.5的pH范围内孵育1小时后,其初始活性可维持在80%左右。进行分子动力学模拟以更好地理解BzGDH在结构背景下的稳定性特征。计算机模拟表明,BzGDH是稳定的,并且在323 K的模拟过程中能够抵抗热保持其整体结构,这与生化研究一致。简而言之,BzGDH强大的稳定性使其成为实际应用中辅酶再生的有吸引力的参与者,特别是对于在酸性pH和高温下进行的催化反应。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/7f140de21421/ijms-18-01198-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/ab5146f34edc/ijms-18-01198-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/a8855a70fe35/ijms-18-01198-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/4c9379321cd8/ijms-18-01198-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/0c63a3cd5f76/ijms-18-01198-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/3f66aae8460a/ijms-18-01198-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/492b6f281a54/ijms-18-01198-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/73871507e5d7/ijms-18-01198-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/443ae4fcdc8c/ijms-18-01198-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/b243c0ceea19/ijms-18-01198-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/7f140de21421/ijms-18-01198-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/ab5146f34edc/ijms-18-01198-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/a8855a70fe35/ijms-18-01198-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/4c9379321cd8/ijms-18-01198-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/0c63a3cd5f76/ijms-18-01198-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/3f66aae8460a/ijms-18-01198-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/492b6f281a54/ijms-18-01198-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/73871507e5d7/ijms-18-01198-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/443ae4fcdc8c/ijms-18-01198-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/b243c0ceea19/ijms-18-01198-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dedb/5486021/7f140de21421/ijms-18-01198-g010.jpg

相似文献

1
Biochemical and Computational Insights on a Novel Acid-Resistant and Thermal-Stable Glucose 1-Dehydrogenase.新型耐酸热稳定葡萄糖1-脱氢酶的生化与计算分析
Int J Mol Sci. 2017 Jun 5;18(6):1198. doi: 10.3390/ijms18061198.
2
Effects of N-/C-Terminal Extra Tags on the Optimal Reaction Conditions, Activity, and Quaternary Structure of Glucose 1-Dehydrogenase.N-/C 末端额外标签对葡萄糖 1-脱氢酶最佳反应条件、活性及四级结构的影响
J Microbiol Biotechnol. 2016 Oct 28;26(10):1708-1716. doi: 10.4014/jmb.1603.03021.
3
Significant improvement of thermal stability of glucose 1-dehydrogenase by introducing disulfide bonds at the tetramer interface.在四聚体界面引入二硫键可显著提高葡萄糖 1-脱氢酶的热稳定性。
Enzyme Microb Technol. 2013 Dec 10;53(6-7):365-72. doi: 10.1016/j.enzmictec.2013.08.001. Epub 2013 Aug 16.
4
A novel glucose dehydrogenase from the white-rot fungus Pycnoporus cinnabarinus: production in Aspergillus niger and physicochemical characterization of the recombinant enzyme.一株白腐真菌密孔菌来源的新型葡萄糖脱氢酶:在黑曲霉中的生产及其重组酶的理化特性分析。
Appl Microbiol Biotechnol. 2014 Dec;98(24):10105-18. doi: 10.1007/s00253-014-5891-4. Epub 2014 Jun 26.
5
[Gene cloning and characterization of a solvent-resistant glucose dehydrogenase from Bacillus sp. YX-1].[芽孢杆菌属YX-1中耐溶剂葡萄糖脱氢酶的基因克隆与特性分析]
Wei Sheng Wu Xue Bao. 2013 Jun 4;53(6):561-8.
6
Cloning and expression in E. coli of an organic solvent-tolerant and alkali-resistant glucose 1-dehydrogenase from Lysinibacillus sphaericus G10.从球形赖氨酸芽孢杆菌 G10 中克隆和在大肠杆菌中表达耐有机溶剂和耐碱的葡萄糖 1-脱氢酶。
Bioresour Technol. 2011 Jan;102(2):1528-36. doi: 10.1016/j.biortech.2010.08.018. Epub 2010 Aug 11.
7
Characterization of a thermostable glucose dehydrogenase with strict substrate specificity from a hyperthermophilic archaeon Thermoproteus sp. GDH-1.来自嗜热古菌嗜热栖热菌属GDH-1的具有严格底物特异性的耐热葡萄糖脱氢酶的特性分析。
Biosci Biotechnol Biochem. 2015;79(7):1094-102. doi: 10.1080/09168451.2015.1018120. Epub 2015 Mar 9.
8
Characterization of a thermally stable and organic solvent-adaptative NAD+ -dependent formate dehydrogenase from Bacillus sp. F1.从芽孢杆菌 F1 中分离出一种热稳定和有机溶剂适应的 NAD+ 依赖性甲酸盐脱氢酶的特性研究。
J Appl Microbiol. 2011 Nov;111(5):1075-85. doi: 10.1111/j.1365-2672.2011.05124.x. Epub 2011 Sep 8.
9
Stabilization of fungi-derived recombinant FAD-dependent glucose dehydrogenase by introducing a disulfide bond.通过引入二硫键实现真菌来源的重组黄素腺嘌呤二核苷酸(FAD)依赖性葡萄糖脱氢酶的稳定化。
Biotechnol Lett. 2015 May;37(5):1091-9. doi: 10.1007/s10529-015-1774-8. Epub 2015 Feb 4.
10
Characterization of the low-temperature activity of Sulfolobus tokodaii glucose-1-dehydrogenase mutants.研究表明,嗜热硫化叶菌葡萄糖-1-脱氢酶突变体在低温下的活性特征。
J Biosci Bioeng. 2014 Oct;118(4):367-71. doi: 10.1016/j.jbiosc.2014.03.002. Epub 2014 Apr 16.

引用本文的文献

1
Direct Electrochemistry of Glucose Dehydrogenase-Functionalized Polymers on a Modified Glassy Carbon Electrode and Its Molecular Recognition of Glucose.葡萄糖脱氢酶功能化聚合物在修饰玻碳电极上的直接电化学及其对葡萄糖的分子识别。
Int J Mol Sci. 2023 Mar 24;24(7):6152. doi: 10.3390/ijms24076152.
2
Enzymes of an alternative pathway of glucose metabolism in obligate methanotrophs.需氧甲烷营养菌糖代谢的替代途径中的酶。
Sci Rep. 2021 Apr 22;11(1):8795. doi: 10.1038/s41598-021-88202-x.
3
Construction of a Robust Cofactor Self-Sufficient Bienzyme Biocatalytic System for Dye Decolorization and its Mathematical Modeling.

本文引用的文献

1
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
2
The Pfam protein families database: towards a more sustainable future.Pfam蛋白质家族数据库:迈向更可持续的未来。
Nucleic Acids Res. 2016 Jan 4;44(D1):D279-85. doi: 10.1093/nar/gkv1344. Epub 2015 Dec 15.
3
Kinetic properties and stability of glucose dehydrogenase from Bacillus amyloliquefaciens SB5 and its potential for cofactor regeneration.
构建用于染料脱色的稳健辅因子自给型双酶生物催化系统及其数学建模。
Int J Mol Sci. 2019 Dec 3;20(23):6104. doi: 10.3390/ijms20236104.
4
Application of WST-8 based colorimetric NAD(P)H detection for quantitative dehydrogenase assays.基于 WST-8 的比色 NAD(P)H 检测在定量脱氢酶分析中的应用。
BMC Biochem. 2019 Apr 8;20(1):4. doi: 10.1186/s12858-019-0108-1.
5
Special Protein Molecules Computational Identification.特殊蛋白质分子的计算鉴定。
Int J Mol Sci. 2018 Feb 10;19(2):536. doi: 10.3390/ijms19020536.
解淀粉芽孢杆菌SB5葡萄糖脱氢酶的动力学特性、稳定性及其辅因子再生潜力
AMB Express. 2015 Dec;5(1):68. doi: 10.1186/s13568-015-0157-9. Epub 2015 Nov 4.
4
Upscale production of ethyl (S)-4-chloro-3-hydroxybutanoate by using carbonyl reductase coupled with glucose dehydrogenase in aqueous-organic solvent system.在水-有机溶剂体系中利用羰基还原酶与葡萄糖脱氢酶偶联来提升(S)-4-氯-3-羟基丁酸乙酯的产量。
Appl Microbiol Biotechnol. 2015 Mar;99(5):2119-29. doi: 10.1007/s00253-014-6245-y. Epub 2014 Dec 9.
5
Efficient production of (R)-2-hydroxy-4-phenylbutyric acid by using a coupled reconstructed D-lactate dehydrogenase and formate dehydrogenase system.利用耦合重组D-乳酸脱氢酶和甲酸脱氢酶系统高效生产(R)-2-羟基-4-苯基丁酸
PLoS One. 2014 Aug 4;9(8):e104204. doi: 10.1371/journal.pone.0104204. eCollection 2014.
6
Molecular characterization of a novel thermal stable reductase capable of decoloration of both azo and triphenylmethane dyes.一种新型热稳定还原酶的分子特征,能够对偶氮染料和三苯甲烷染料进行脱色。
Appl Microbiol Biotechnol. 2015 Jan;99(1):255-67. doi: 10.1007/s00253-014-5896-z. Epub 2014 Jun 29.
7
SWISS-MODEL: modelling protein tertiary and quaternary structure using evolutionary information.SWISS-MODEL:利用进化信息进行蛋白质三级和四级结构建模。
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W252-8. doi: 10.1093/nar/gku340. Epub 2014 Apr 29.
8
Efficicent (R)-phenylethanol production with enantioselectivity-alerted (S)-carbonyl reductase II and NADPH regeneration.利用对映选择性改变的(S)-羰基还原酶II和NADPH再生高效生产(R)-苯乙醇。
PLoS One. 2013 Dec 17;8(12):e83586. doi: 10.1371/journal.pone.0083586. eCollection 2013.
9
Simultaneously improving stability and specificity of cell surface displayed glucose dehydrogenase mutants to construct whole-cell biocatalyst for glucose biosensor application.同时提高细胞表面展示葡萄糖脱氢酶突变体的稳定性和特异性,构建用于葡萄糖生物传感器应用的全细胞生物催化剂。
Bioresour Technol. 2013 Nov;147:492-498. doi: 10.1016/j.biortech.2013.08.088. Epub 2013 Aug 23.
10
Production of (3S)-acetoin from diacetyl by using stereoselective NADPH-dependent carbonyl reductase and glucose dehydrogenase.利用立体选择性 NADPH 依赖型羰基还原酶和葡萄糖脱氢酶从双乙酰生产(3S)-乙酰基-2,3-丁二醇。
Bioresour Technol. 2013 Jun;137:111-5. doi: 10.1016/j.biortech.2013.02.115. Epub 2013 Mar 7.