Olmos-Pérez Lorena, Roura Álvaro, Pierce Graham J, Boyer Stéphane, González Ángel F
Instituto de Investigaciones Marinas, Ecobiomar, CSICVigo, Spain.
La Trobe UniversityMelbourne, VIC, Australia.
Front Physiol. 2017 May 24;8:321. doi: 10.3389/fphys.2017.00321. eCollection 2017.
The high mortality of cephalopod early stages is the main bottleneck to grow them from paralarvae to adults in culture conditions, probably because the inadequacy of the diet that results in malnutrition. Since visual analysis of digestive tract contents of paralarvae provides little evidence of diet composition, the use of molecular tools, particularly next generation sequencing (NGS) platforms, offers an alternative to understand prey preferences and nutrient requirements of wild paralarvae. In this work, we aimed to determine the diet of paralarvae of the loliginid squid and to enhance the knowledge of the diet of recently hatched paralarvae collected in different areas and seasons in an upwelling area (NW Spain). DNA from the dissected digestive glands of 32 and 64 paralarvae was amplified with universal primers for the mitochondrial gene COI, and specific primers targeting the mitochondrial gene 16S gene of arthropods and the mitochondrial gene 16S of Chordata. Following high-throughput DNA sequencing with the MiSeq run (Illumina), up to 4,124,464 reads were obtained and 234,090 reads of prey were successfully identified in 96.87 and 81.25% of octopus and squid paralarvae, respectively. Overall, we identified 122 Molecular Taxonomic Units (MOTUs) belonging to several taxa of decapods, copepods, euphausiids, amphipods, echinoderms, molluscs, and hydroids. Redundancy analysis (RDA) showed seasonal and spatial variability in the diet of and spatial variability in diet. General Additive Models (GAM) of the most frequently detected prey families of revealed seasonal variability of the presence of copepods (family Paracalanidae) and ophiuroids (family Euryalidae), spatial variability in presence of crabs (family Pilumnidae) and preference in small individual octopus paralarvae for cladocerans (family Sididae) and ophiuroids. No statistically significant variation in the occurrences of the most frequently identified families was revealed in . Overall, these results provide new clues about dietary preferences of wild cephalopod paralarvae, thus opening up new scenarios for research on trophic ecology and digestive physiology under controlled conditions.
头足类幼体的高死亡率是在养殖条件下将其从仔鱼培育成成体的主要瓶颈,这可能是由于食物不足导致营养不良。由于对仔鱼消化道内容物的视觉分析几乎无法提供食物组成的证据,因此使用分子工具,特别是下一代测序(NGS)平台,为了解野生仔鱼的猎物偏好和营养需求提供了一种替代方法。在这项研究中,我们旨在确定枪乌贼科仔鱼的食物,并增进对在上升流区域(西班牙西北部)不同区域和季节采集的新孵化仔鱼食物的了解。用针对线粒体基因COI的通用引物,以及针对节肢动物线粒体基因16S和脊索动物线粒体基因16S的特异性引物,对32只和64只仔鱼解剖后的消化腺DNA进行扩增。在使用MiSeq测序仪(Illumina)进行高通量DNA测序后,分别在96.87%的章鱼仔鱼和81.25%的鱿鱼仔鱼中成功鉴定出多达4,124,464条 reads和234,090条猎物reads。总体而言,我们鉴定出122个分子分类单元(MOTUs),它们属于十足目、桡足类、磷虾类、端足类、棘皮动物、软体动物和水螅虫类等几个分类群。冗余分析(RDA)显示了仔鱼食物的季节性和空间变异性以及食物的空间变异性。对最常检测到的仔鱼猎物科的广义相加模型(GAM)显示,桡足类(伪镖水蚤科)和蛇尾类(真蛇尾科)的出现存在季节性变化,螃蟹(毛带蟹科)的出现存在空间变异性,小型章鱼仔鱼对枝角类(仙达蚤科)和蛇尾类有偏好。在仔鱼中,最常鉴定出的科的出现频率没有统计学上的显著差异。总体而言,这些结果为野生头足类仔鱼的食物偏好提供了新线索,从而为受控条件下的营养生态学和消化生理学研究开辟了新的前景。