Knijnenburg Jeroen, Uytdewilligen Madiek E W, van Hassel Daniella A C M, Oostenbrink Rianne, Eussen Bert H J, de Klein Annelies, Brooks Alice S, van Zutven Laura J C M
Department of Clinical Genetics, Erasmus Medical Center, Rotterdam, The Netherlands.
Department of Clinical Genetics, Erasmus Medical Center, Rotterdam, The Netherlands.
Eur J Med Genet. 2017 Sep;60(9):445-450. doi: 10.1016/j.ejmg.2017.06.003. Epub 2017 Jun 8.
Using SNP array and FISH analysis, a patient with moderate intellectual disability and obesity was found to harbour an atypical 1.6 Mb inverted duplication on 8p23.1, directly flanked by a distally located interstitial deletion of 2.3 Mb and a terminal segmental uniparental disomy. The duplicated and deleted regions lie exactly between the two segmental duplication regions. These segmental duplications on chromosome 8p23.1 are known to be involved in chromosomal rearrangements because of mutual homology and homology to other genomic regions. Genomic instability mediated by these segmental duplications is generally caused by non-allelic homologous recombination, resulting in deletions, reciprocal duplications, inversions and translocations. Additional analysis of the parental origin of the fragments of this atypical inverted duplication/interstitial deletion shows paternal contribution in the maternal derivate chromosome 8. Combined with the finding that the normal chromosome 8 carries an inversion in 8p23.1 we hypothesize that a double strand break in 8p23.1 of the maternal chromosome was postzygotically repaired with the paternal inverted copy resulting in a duplication, deletion and segmental uniparental disomy, with no particular mediation of the 8p23.1 segmental duplication regions in recombination.
通过单核苷酸多态性(SNP)阵列和荧光原位杂交(FISH)分析,发现一名患有中度智力残疾和肥胖症的患者在8p23.1区域存在一个非典型的1.6 Mb倒位重复,其直接侧翼为一个位于远端的2.3 Mb间质性缺失和一个末端节段性单亲二体。重复和缺失区域恰好位于两个节段性重复区域之间。已知8p23.1染色体上的这些节段性重复由于相互同源以及与其他基因组区域的同源性而参与染色体重排。由这些节段性重复介导的基因组不稳定性通常由非等位基因同源重组引起,导致缺失、相互重复、倒位和易位。对这个非典型倒位重复/间质性缺失片段的亲本来源进行的进一步分析显示,在母源衍生的8号染色体上有父源贡献。结合正常8号染色体在8p23.1区域存在倒位这一发现,我们推测母源染色体8p23.1区域的双链断裂在合子后通过父源倒位拷贝进行修复,从而导致重复、缺失和节段性单亲二体,在重组过程中8p23.1节段性重复区域没有特别的介导作用。