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Panel of seven long noncoding RNA as a candidate prognostic biomarker for ovarian cancer.

作者信息

Zhan Xiaohui, Dong Chuanpeng, Liu Gang, Li Yixue, Liu Lei

机构信息

Key Lab of Computational Biology, CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai.

University of Chinese Academy of Sciences, Beijing.

出版信息

Onco Targets Ther. 2017 Jun 1;10:2805-2813. doi: 10.2147/OTT.S128797. eCollection 2017.


DOI:10.2147/OTT.S128797
PMID:28620265
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5466362/
Abstract

Ovarian cancer is one of the most common and lethal gynecological malignancies. The diagnosis of ovarian cancer is often at an advanced stage. Accumulated evidence suggests that long noncoding RNAs (lncRNAs) play important roles during ovarian tumorigenesis. In this study, using the lncRNA-mining approach, we analyzed lncRNA expression profiles of 493 ovarian cancer patients from Gene Expression Omnibus datasets, and identified a signature group of seven lncRNAs (BC037530, AK021924, AK094536, AK094536, BC062365, BC004123 and BC007937) associated with patient survival in the training dataset GSE9891. We also formulated a risk score model to divide patients into low-risk and high-risk groups based on the expression of these seven lncRNAs. We further validated the predictive power of our risk score model in two other datasets, GSE26193 and GSE63885. Our analysis showed that the seven-lncRNA signature can serve as an independent predictor apart from Federation of Gynecology and Obstetrics (FIGO) stage and patient age. Further investigation revealed the seven-lncRNA signature correlated with few critical signaling pathways involved in cancer. Combined, all these findings strongly support that the seven-lncRNA signature can serve as a strong prognosis biomarker.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/b23a7245c24f/ott-10-2805Fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/820b0df2a59f/ott-10-2805Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/9eca405d34c5/ott-10-2805Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/b6aa0f83c476/ott-10-2805Fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/fa711d31cf28/ott-10-2805Fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/0907dcf75625/ott-10-2805Fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/b23a7245c24f/ott-10-2805Fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/820b0df2a59f/ott-10-2805Fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/9eca405d34c5/ott-10-2805Fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/b6aa0f83c476/ott-10-2805Fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/fa711d31cf28/ott-10-2805Fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/0907dcf75625/ott-10-2805Fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69b6/5466362/b23a7245c24f/ott-10-2805Fig6.jpg

相似文献

[1]
Panel of seven long noncoding RNA as a candidate prognostic biomarker for ovarian cancer.

Onco Targets Ther. 2017-6-1

[2]
A potential signature of eight long non-coding RNAs predicts survival in patients with non-small cell lung cancer.

J Transl Med. 2015-7-17

[3]
A seven-long noncoding RNA signature predicts relapse in patients with early-stage lung adenocarcinoma.

J Cell Biochem. 2019-5-3

[4]
A Potential Immune-Related Long Non-coding RNA Prognostic Signature for Ovarian Cancer.

Front Genet. 2021-7-21

[5]
Cox-LASSO Analysis Reveals a Ten-lncRNA Signature to Predict Outcomes in Patients with High-Grade Serous Ovarian Cancer.

DNA Cell Biol. 2019-10-29

[6]
detection of potential prognostic circRNAs through a re-annotation strategy in ovarian cancer.

Oncol Lett. 2019-4

[7]
A novel seven-long non-coding RNA signature predicts survival in early stage lung adenocarcinoma.

Oncotarget. 2017-2-28

[8]
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DNA Cell Biol. 2020-6-9

[9]
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J Exp Clin Cancer Res. 2015-9-11

[10]
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Oncotarget. 2017-6-28

引用本文的文献

[1]
LncRNAs signatures in gynecological cancers: ovarian and endometrial cancers.

Clin Transl Oncol. 2025-8-11

[2]
(In)Distinctive Role of Long Non-Coding RNAs in Common and Rare Ovarian Cancers.

Cancers (Basel). 2021-10-9

[3]
Ovarian Cancer: Biomarkers and Targeted Therapy.

Biomedicines. 2021-6-18

[4]
Screening and Identification of an Immune-Associated lncRNA Prognostic Signature in Ovarian Carcinoma: Evidence from Bioinformatic Analysis.

Biomed Res Int. 2021

[5]
Long non-coding RNA RP11-379k17.4 derived microRNA-200c-3p modulates human endometrial cancer by targeting Noxa.

J Cancer. 2021-2-22

[6]
A novel risk score system for assessment of ovarian cancer based on co-expression network analysis and expression level of five lncRNAs.

BMC Med Genet. 2019-6-10

[7]
detection of potential prognostic circRNAs through a re-annotation strategy in ovarian cancer.

Oncol Lett. 2019-4

[8]
Identification of potential prognostic TF-associated lncRNAs for predicting survival in ovarian cancer.

J Cell Mol Med. 2018-12-13

[9]
LncRNA RP11-79H23.3 Functions as a Competing Endogenous RNA to Regulate PTEN Expression through Sponging hsa-miR-107 in the Development of Bladder Cancer.

Int J Mol Sci. 2018-8-26

[10]
Long non-coding RNAs in ovarian cancer.

J Exp Clin Cancer Res. 2018-6-19

本文引用的文献

[1]
Targeting a Long Noncoding RNA in Breast Cancer.

N Engl J Med. 2016-6-9

[2]
Long Noncoding RNAs in Cancer Pathways.

Cancer Cell. 2016-4-11

[3]
Overexpression of the long noncoding RNA TUG1 protects against cold-induced injury of mouse livers by inhibiting apoptosis and inflammation.

FEBS J. 2016-3-2

[4]
Long noncoding RNA Hotair mediated angiogenesis in nasopharyngeal carcinoma by direct and indirect signaling pathways.

Oncotarget. 2016-1-26

[5]
Long Noncoding RNA Ceruloplasmin Promotes Cancer Growth by Altering Glycolysis.

Cell Rep. 2015-12-22

[6]
microRNA and Ovarian Cancer.

Adv Exp Med Biol. 2015

[7]
Current state of biomarkers in ovarian cancer prognosis.

Future Oncol. 2015

[8]
lncRNAs and microRNAs with a role in cancer development.

Biochim Biophys Acta. 2016-1

[9]
Expression and functions of long noncoding RNAs during human T helper cell differentiation.

Nat Commun. 2015-4-23

[10]
The landscape of long noncoding RNAs in the human transcriptome.

Nat Genet. 2015-3

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