Huang Ching-Shin, Pedersen Bjørn Panyella, Stokes David L
Molecular Biophysics Graduate Program, New York University School of Medicine, Skirball Institute, 540 First Avenue, New York, New York 10016, USA.
Department of Molecular Biology and Genetics, Aarhus University, Gustav Wieds Vej 10, DK-8000 Aarhus C, Denmark.
Nature. 2017 Jun 29;546(7660):681-685. doi: 10.1038/nature22970. Epub 2017 Jun 21.
Cellular potassium import systems play a fundamental role in osmoregulation, pH homeostasis and membrane potential in all domains of life. In bacteria, the kdp operon encodes a four-subunit potassium pump that maintains intracellular homeostasis, cell shape and turgor under conditions in which potassium is limiting. This membrane complex, called KdpFABC, has one channel-like subunit (KdpA) belonging to the superfamily of potassium transporters and another pump-like subunit (KdpB) belonging to the superfamily of P-type ATPases. Although there is considerable structural and functional information about members of both superfamilies, the mechanism by which uphill potassium transport through KdpA is coupled with ATP hydrolysis by KdpB remains poorly understood. Here we report the 2.9 Å X-ray structure of the complete Escherichia coli KdpFABC complex with a potassium ion within the selectivity filter of KdpA and a water molecule at a canonical cation site in the transmembrane domain of KdpB. The structure also reveals two structural elements that appear to mediate the coupling between these two subunits. Specifically, a protein-embedded tunnel runs between these potassium and water sites and a helix controlling the cytoplasmic gate of KdpA is linked to the phosphorylation domain of KdpB. On the basis of these observations, we propose a mechanism that repurposes protein channel architecture for active transport across biomembranes.
细胞钾离子导入系统在所有生命域的渗透调节、pH稳态和膜电位中起着基础性作用。在细菌中,kdp操纵子编码一种四亚基钾泵,在钾离子受限的条件下维持细胞内稳态、细胞形状和膨压。这种膜复合物称为KdpFABC,有一个属于钾离子转运蛋白超家族的通道样亚基(KdpA)和另一个属于P型ATP酶超家族的泵样亚基(KdpB)。尽管关于这两个超家族成员有大量的结构和功能信息,但钾离子通过KdpA的上坡转运与KdpB的ATP水解偶联的机制仍知之甚少。在此,我们报道了完整的大肠杆菌KdpFABC复合物的2.9埃X射线结构,其中KdpA的选择性过滤器中有一个钾离子,KdpB跨膜结构域的一个典型阳离子位点有一个水分子。该结构还揭示了两个似乎介导这两个亚基之间偶联的结构元件。具体而言,一个蛋白质包埋的通道在这些钾离子和水分子位点之间延伸,一个控制KdpA细胞质门的螺旋与KdpB的磷酸化结构域相连。基于这些观察结果,我们提出了一种将蛋白质通道结构重新用于跨生物膜主动运输的机制。