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环状RNA在转录组调控中的新作用。

The emerging role of circular RNAs in transcriptome regulation.

作者信息

Huang S, Yang B, Chen B J, Bliim N, Ueberham U, Arendt T, Janitz M

机构信息

School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia.

Paul-Flechsig-Institute for Brain Research, University of Leipzig, Leipzig, Germany.

出版信息

Genomics. 2017 Oct;109(5-6):401-407. doi: 10.1016/j.ygeno.2017.06.005. Epub 2017 Jun 26.

Abstract

Circular RNAs (circRNAs) are a recently discovered form of RNA that has been found to regulate mammalian transcription. CircRNAs are covalently closed, single-stranded transcripts produced from precursor mRNA. While initially circRNAs were considered to be splicing artefacts, next-generation RNA sequencing of non-polyadenylated transcriptomes has recently shown that the expression of circRNAs is widespread and over 20% of expressed genes in examined cells and tissues can produce these transcripts. Until now thousands of circRNAs have been discovered in organisms ranging from Drosophila melanogaster to Homo sapiens. Functional studies indicate that these transcripts regulate expression of protein-coding linear transcripts and thus comprise an important component of gene expression regulation. Here we provide a comprehensive overview on the biology of circRNAs, including the expression patterns and function. Moreover, we discuss current methodologies for the discovery and validation of circular transcripts. Finally, perspectives on the utilization of circRNA as molecular markers of complex diseases are presented.

摘要

环状RNA(circRNAs)是最近发现的一种RNA形式,已被发现可调节哺乳动物的转录。circRNAs是从前体mRNA产生的共价闭合的单链转录本。虽然最初circRNAs被认为是剪接假象,但最近对非多聚腺苷酸化转录组的新一代RNA测序表明,circRNAs的表达很普遍,在所检测的细胞和组织中,超过20%的表达基因可产生这些转录本。到目前为止,在从黑腹果蝇到智人的各种生物体中已经发现了数千种circRNAs。功能研究表明,这些转录本调节蛋白质编码线性转录本的表达,因此构成了基因表达调控的重要组成部分。在这里,我们提供了关于circRNAs生物学的全面概述,包括表达模式和功能。此外,我们讨论了目前发现和验证环状转录本的方法。最后,还介绍了将circRNA用作复杂疾病分子标志物的前景。

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