Department of Mathematics, University of Bristol, Bristol BS8 1TH, United Kingdom.
Laboratory of Cardiovascular Science, National Institute on Aging, NIH, Baltimore, MD 21224.
Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7525-7530. doi: 10.1073/pnas.1701409114. Epub 2017 Jul 3.
Intracellular Ca signals represent a universal mechanism of cell function. Messages carried by Ca are local, rapid, and powerful enough to be delivered over the thermal noise. A higher signal-to-noise ratio is achieved by a cooperative action of Ca release channels such as IP3 receptors or ryanodine receptors arranged in clusters (release units) containing a few to several hundred release channels. The channels synchronize their openings via Ca-induced Ca release, generating high-amplitude local Ca signals known as puffs in neurons and sparks in muscle cells. Despite the positive feedback nature of the activation, Ca signals are strictly confined in time and space by an unexplained termination mechanism. Here we show that the collective transition of release channels from an open to a closed state is identical to the phase transition associated with the reversal of magnetic field in an Ising ferromagnet. Our simple quantitative criterion closely predicts the Ca store depletion level required for spark termination for each cluster size. We further formulate exact requirements that a cluster of release channels should satisfy in any cell type for our mapping to the Ising model and the associated formula to remain valid. Thus, we describe deterministically the behavior of a system on a coarser scale (release unit) that is random on a finer scale (release channels), bridging the gap between scales. Our results provide exact mapping of a nanoscale biological signaling model to an interacting particle system in statistical physics, making the extensive mathematical apparatus available to quantitative biology.
细胞内 Ca 信号代表了细胞功能的一种普遍机制。Ca 传递的信息是局部的、快速的且足够强大,可以在热噪声中传递。通过 IP3 受体或ryanodine 受体等 Ca 释放通道的协作作用,可以实现更高的信号噪声比,这些通道被排列成包含几个到几百个释放通道的簇(释放单元)。通道通过 Ca 诱导的 Ca 释放来同步其开放,从而产生被称为神经元中的脉冲和肌肉细胞中的火花的高幅度局部 Ca 信号。尽管激活具有正反馈性质,但由于未知的终止机制,Ca 信号在时间和空间上受到严格限制。在这里,我们表明,释放通道从开放状态到关闭状态的集体转变与铁磁体中磁场反转相关的相变相同。我们的简单定量标准密切预测了每个簇大小的火花终止所需的 Ca 库耗竭水平。我们进一步制定了精确的要求,即任何细胞类型的释放通道簇都应满足我们对伊辛模型的映射和相关公式仍然有效的要求。因此,我们确定性地描述了更粗尺度(释放单元)上系统的行为,而在更细尺度(释放通道)上系统的行为是随机的,从而在尺度之间架起了桥梁。我们的结果为纳米尺度生物信号模型到统计物理学中相互作用粒子系统提供了精确的映射,为定量生物学提供了广泛的数学工具。