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解析色甘酸钠与 HSA 的热力学、结合机制和构象变化:多光谱、等温滴定量热法和分子对接研究。

Unraveling the thermodynamics, binding mechanism and conformational changes of HSA with chromolyn sodium: Multispecroscopy, isothermal titration calorimetry and molecular docking studies.

机构信息

Department of Chemistry, Aligarh Muslim University, Aligarh 202002, Uttar Pradesh, India.

Department of Chemistry, Aligarh Muslim University, Aligarh 202002, Uttar Pradesh, India.

出版信息

Int J Biol Macromol. 2017 Dec;105(Pt 1):92-102. doi: 10.1016/j.ijbiomac.2017.06.122. Epub 2017 Jul 6.

Abstract

Cromolyn sodium is an anti-allergic drug effective for treatment in asthma and allergic rhinitis. In this project, interaction of chromolyn sodium (CS) with human serum albumin (HSA) has been investigated by various techniques such as UV-vis, fluorescence, circular dichorism (CD), fourier transform infrared (FT-IR) spectroscopy, isothermal titration calorimetric (ITC) and molecular docking. The fluorescence quenching results revealed that there was static quenching mechanism in the interactions of CS with HSA. The binding constant (K), enthalpy change (ΔH°), entropy change (ΔS°) and Gibbs free energy change (ΔG°) were calculated. The negative values of TΔS° and ΔH° obtained from fluorescence spectroscopy and isothermal titration calorimetry, indicate that hydrogen bonding and van der Waal's forces played major role in the binding process and the reaction is exothermic in nature. The binding constant (K) was found to be in the order of 10M which depicts a good binding affinity of CS towards HSA. The conformational changes in the HSA due to interaction of CS were investigated from CD and FT-IR spectroscopy. The binding site of CS in HSA was sub-domain IIA as evident from site probing experiment and molecular docking studies.

摘要

色甘酸钠是一种有效的抗过敏药物,可用于治疗哮喘和过敏性鼻炎。在这个项目中,通过各种技术,如紫外可见分光光度法、荧光光谱法、圆二色性(CD)光谱法、傅里叶变换红外(FT-IR)光谱法、等温热力学滴定(ITC)和分子对接,研究了色甘酸钠(CS)与人血清白蛋白(HSA)的相互作用。荧光猝灭结果表明,CS 与 HSA 的相互作用存在静态猝灭机制。计算了结合常数(K)、焓变(ΔH°)、熵变(ΔS°)和吉布斯自由能变(ΔG°)。荧光光谱和等温滴定 calorimetry 中获得的 TΔS°和 ΔH°的负值表明,氢键和范德华力在结合过程中起主要作用,反应本质上是放热的。结合常数(K)的顺序为 10M,表明 CS 与 HSA 具有良好的结合亲和力。通过 CD 和 FT-IR 光谱研究了 CS 相互作用引起的 HSA 构象变化。从位点探测实验和分子对接研究中可以看出,CS 在 HSA 中的结合位点是亚域 IIA。

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