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担子菌黄孢原毛平革菌6家族纤维二糖水解酶的晶体结构

Crystal structure of a family 6 cellobiohydrolase from the basidiomycete Phanerochaete chrysosporium.

作者信息

Tachioka Mikako, Nakamura Akihiko, Ishida Takuya, Igarashi Kiyohiko, Samejima Masahiro

机构信息

Department of Biomaterial Sciences, Graduate School of Agricultural and Life Sciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan.

出版信息

Acta Crystallogr F Struct Biol Commun. 2017 Jul 1;73(Pt 7):398-403. doi: 10.1107/S2053230X17008093. Epub 2017 Jun 17.

Abstract

Cellobiohydrolases belonging to glycoside hydrolase family 6 (CBH II, Cel6A) play key roles in the hydrolysis of crystalline cellulose. CBH II from the white-rot fungus Phanerochaete chrysosporium (PcCel6A) consists of a catalytic domain (CD) and a carbohydrate-binding module connected by a linker peptide, like other known fungal cellobiohydrolases. In the present study, the CD of PcCel6A was crystallized without ligands, and p-nitrophenyl β-D-cellotrioside (pNPG3) was soaked into the crystals. The determined structures of the ligand-free and pNPG3-soaked crystals revealed that binding of cellobiose at substrate subsites +1 and +2 induces a conformational change of the N-terminal and C-terminal loops, switching the tunnel-shaped active site from the open to the closed form.

摘要

属于糖苷水解酶家族6的纤维二糖水解酶(CBH II,Cel6A)在结晶纤维素的水解中起关键作用。来自白腐真菌黄孢原毛平革菌的CBH II(PcCel6A)与其他已知的真菌纤维二糖水解酶一样,由一个催化结构域(CD)和一个通过连接肽连接的碳水化合物结合模块组成。在本研究中,PcCel6A的CD在没有配体的情况下结晶,然后将对硝基苯基β-D-纤维三糖苷(pNPG3)浸泡到晶体中。无配体晶体和浸泡pNPG3晶体的测定结构表明,纤维二糖在底物亚位点+1和+2处的结合会诱导N端和C端环的构象变化,将隧道状活性位点从开放形式转变为封闭形式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a006/5505244/fe6d00e59cb5/f-73-00398-fig1.jpg

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