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复制过程中的复杂性传递。

Complexity transmission during replication.

作者信息

Davis B K

出版信息

Proc Natl Acad Sci U S A. 1979 May;76(5):2288-92. doi: 10.1073/pnas.76.5.2288.

DOI:10.1073/pnas.76.5.2288
PMID:287070
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC383584/
Abstract

The transmission of complexity during DNA replication has been investigated to clarify the significance of this molecular property in a deterministic process. Complexity was equated with the amount of randomness within an ordered molecular structure and measured by the entropy of a posteriori probabilities for discrete (monomer sequences, atomic bonds) and continuous (torsion angle sequences) structural parameters in polynucleotides, proteins, and ligand molecules. A theoretical analysis revealed that sequence complexity decreases during transmission from DNA to protein. It was also found that sequence complexity limits the attainable complexity in the folding of a polypeptide chain and that a protein cannot interact with a ligand moiety of higher complexity. The analysis indicated, furthermore, that in any deterministic molecular process a cause possesses more complexity than its effect. This outcome broadly complies with Curie's symmetry principle. Results from an analysis of an extensive set of experimental data are presented; they corroborate these findings. It is suggested, therefore, that complexity governs the direction of order-order molecular transformations. Two biological implications are (i) replication of DNA in a stepwise, repetitive manner by a polymerase appears to be a necessary consequence of structural constraints imposed by complexity, and (ii) during evolution, increases in complexity had to involve a nondeterministic mechanism. This latter requirement apparently applied also to development of the first replicating system on earth.

摘要

为了阐明这种分子特性在一个确定性过程中的重要性,人们对DNA复制过程中复杂性的传递进行了研究。复杂性被等同于有序分子结构内的随机量,并通过多核苷酸、蛋白质和配体分子中离散(单体序列、原子键)和连续(扭转角序列)结构参数的后验概率熵来衡量。理论分析表明,从DNA到蛋白质的传递过程中序列复杂性降低。还发现序列复杂性限制了多肽链折叠中可达到的复杂性,并且蛋白质不能与更高复杂性的配体部分相互作用。此外,分析表明,在任何确定性分子过程中,原因比其结果具有更多的复杂性。这一结果大致符合居里对称原理。给出了对大量实验数据的分析结果;它们证实了这些发现。因此,有人提出复杂性决定了有序-有序分子转变的方向。两个生物学意义是:(i)聚合酶以逐步、重复的方式复制DNA似乎是复杂性所施加的结构限制的必然结果,以及(ii)在进化过程中,复杂性的增加必须涉及一种非确定性机制。后一个要求显然也适用于地球上第一个复制系统的发展。

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引用本文的文献

1
On producing more complexity than entropy in replication.关于在复制过程中产生比熵更多的复杂性。
Proc Natl Acad Sci U S A. 1994 Jul 5;91(14):6639-43. doi: 10.1073/pnas.91.14.6639.
2
Role of replication time in the control of tissue-specific gene expression.复制时间在组织特异性基因表达调控中的作用。
Am J Hum Genet. 1987 Feb;40(2):151-73.

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